RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 DAPL1A0PJW8 107 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 TRABD2BA6NFA1 517 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 FAM171A2A8MVW0 826 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 LRRTM2O43300 516 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 ARHGEF9O43307 516 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 SULT1C4O75897 302 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 NEURL1O76050 574 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 OR6A2O95222 327 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 F10P00742 488 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 PYCR1P32322 319 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 SOX6P35712 828 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 P2RY4P51582 365 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 HCCSP53701 268 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 RGS21Q2M5E4 152 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 LCN1P1Q5VSP4 162 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 NHLRC1Q6VVB1 395 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 SSX6Q7RTT6 188 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 POMGNT2Q8NAT1 580 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 CHPT1Q8WUD6 406 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 SLC25A43Q8WUT9 341 aaPredicted RBP18.82■□□□□ 0.6
GPC1-202ENST00000420138 ALG12Q9BV10 488 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 A0A1W2PNR3 127 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 AKR7A3O95154 331 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 ITGA3P26006 1051 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 ACVR1BP36896 505 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 FOXC1Q12948 553 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 SRSF6Q13247 344 aaKnown RBP18.81■□□□□ 0.6
GPC1-202ENST00000420138 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.81■□□□□ 0.6
GPC1-202ENST00000420138 SPINK14Q6IE38 97 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 DCDC5Q6ZRR9 648 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 VASH2Q86V25 355 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 WDFY1Q8IWB7 410 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 COX4I2Q96KJ9 171 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 FER1L6-AS2Q96M78 137 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 CNN2Q99439 309 aaKnown RBP18.81■□□□□ 0.6
GPC1-202ENST00000420138 SYT4Q9H2B2 425 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 EXOSC4Q9NPD3 245 aaKnown RBP18.81■□□□□ 0.6
GPC1-202ENST00000420138 FAIMQ9NVQ4 179 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 LRFN1Q9P244 771 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 ZMIZ1Q9ULJ6 1067 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 EML6Q6ZMW3 1958 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 PINLYPA6NC86 204 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 MAGEB3O15480 346 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 SELENOFO60613 162 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 NAA10P41227 235 aaPredicted RBP18.81■□□□□ 0.6
GPC1-202ENST00000420138 OC90Q02509 493 aaPredicted RBP18.81■□□□□ 0.6
GPC1-202ENST00000420138 TLE3Q04726 772 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 RUNX1T1Q06455 604 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 EEF1A1P5Q5VTE0 462 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 TUBA3EQ6PEY2 450 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 PM20D2Q8IYS1 436 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 CENPSQ8N2Z9 138 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 C5orf34Q96MH7 638 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 SNX18Q96RF0 628 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 C6orf62Q9GZU0 229 aaPredicted RBP18.81■□□□□ 0.6
GPC1-202ENST00000420138 SRA1Q9HD15 236 aaKnown RBP18.81■□□□□ 0.6
GPC1-202ENST00000420138 B3GAT1Q9P2W7 334 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 TEKT2Q9UIF3 430 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 KLK13Q9UKR3 277 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 SSR3Q9UNL2 185 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 MOKQ9UQ07 419 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 B3GALT5Q9Y2C3 310 aa18.81■□□□□ 0.6
GPC1-202ENST00000420138 DCHS1Q96JQ0 3298 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 OR2M5A3KFT3 312 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 PFDN1O60925 122 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 RFPL3SP0C7P2 107 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 FKBP2P26885 142 aaKnown RBP18.8■□□□□ 0.6
GPC1-202ENST00000420138 B3GALT5-AS1P59052 145 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 GPR85P60893 370 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 ACTC1P68032 377 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 ACTA1P68133 377 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 FOXO1Q12778 655 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 MELKQ14680 651 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 TMEM176BQ3YBM2 270 aaPredicted RBP18.8■□□□□ 0.6
GPC1-202ENST00000420138 ABHD17BQ5VST6 288 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 VASNQ6EMK4 673 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 ZFP41Q8N8Y5 198 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 ZNF511Q8NB15 262 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 OR6K6Q8NGW6 343 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 SLC39A7Q92504 469 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 SIGLEC12Q96PQ1 595 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 OR5B2Q96R09 309 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 NUAK2Q9H093 628 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 SIAEQ9HAT2 523 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 TBCCD1Q9NVR7 557 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 GALNT8Q9NY28 637 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 VSX1Q9NZR4 365 aaPredicted RBP18.8■□□□□ 0.6
GPC1-202ENST00000420138 HDGFL3Q9Y3E1 203 aa18.8■□□□□ 0.6
GPC1-202ENST00000420138 A0A1W2PNV4 684 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 PRSS37A4D1T9 235 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 NPIPB13A6NJU9 1138 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 ZNF814B7Z6K7 855 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 NPIPB4C9JG80 1138 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 OR2T7P0C7T2 308 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 GTF2E2P29084 291 aaKnown RBP18.79■□□□□ 0.6
GPC1-202ENST00000420138 S100A5P33763 92 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 SFTPDP35247 375 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 TMPRSS11AQ6ZMR5 421 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 KLBQ86Z14 1044 aa18.79■□□□□ 0.6
GPC1-202ENST00000420138 SLC35F2Q8IXU6 374 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms