RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 RAB39AQ14964 217 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 ALKBH6Q3KRA9 238 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
NFE4-201ENST00000420058 AVPI1Q5T686 147 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 LCE2DQ5TA82 110 aaPredicted RBP12.14□□□□□ -0.47
NFE4-201ENST00000420058 WDR88Q6ZMY6 472 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 NET1Q7Z628 596 aaPredicted RBP12.14□□□□□ -0.47
NFE4-201ENST00000420058 SKA3Q8IX90 412 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 PAQR4Q8N4S7 273 aaPredicted RBP12.14□□□□□ -0.47
NFE4-201ENST00000420058 LSMEM1Q8N8F7 131 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 ADPRHL1Q8NDY3 354 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 DVL3Q92997 716 aaPredicted RBP12.14□□□□□ -0.47
NFE4-201ENST00000420058 SLC35B4Q969S0 331 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 TPT1P8Q9HAU6 139 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 C12orf10Q9HB07 376 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 MED29Q9NX70 200 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 CALML5Q9NZT1 146 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 KLHL14Q9P2G3 628 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 ZNF232Q9UNY5 417 aa12.14□□□□□ -0.47
NFE4-201ENST00000420058 IGLV3-9A0A075B6K5 115 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 TRAV36DV7A0A075B6V5 113 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 A0A087WUJ7 227 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 C17orf100A8MU93 164 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 RFXANKO14593 260 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 BIRC5O15392 142 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 MPZL1O95297 269 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 BGLAPP02818 100 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 SERPINA5P05154 406 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 ZCCHC18P0CG32 403 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 CRYBB2P43320 205 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
NFE4-201ENST00000420058 DSTNP60981 165 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 UBA52P62987 128 aaKnown RBP12.13□□□□□ -0.47
NFE4-201ENST00000420058 MVKQ03426 396 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 LRRC74AQ0VAA2 488 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 ZNF311Q5JNZ3 666 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 REP15Q6BDI9 236 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 JMJD8Q96S16 334 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 SUCNR1Q9BXA5 334 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 ROPN1BQ9BZX4 212 aaPredicted RBP12.13□□□□□ -0.47
NFE4-201ENST00000420058 DENND2DQ9H6A0 471 aaPredicted RBP12.13□□□□□ -0.47
NFE4-201ENST00000420058 ROPN1Q9HAT0 212 aaPredicted RBP12.13□□□□□ -0.47
NFE4-201ENST00000420058 BCL2L10Q9HD36 194 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 SLC52A3Q9NQ40 469 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 POFUT2Q9Y2G5 429 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 IFT52Q9Y366 437 aa12.13□□□□□ -0.47
NFE4-201ENST00000420058 IGHV2-5P01817 119 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 HKR1P10072 659 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 ARAFP10398 606 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 ANPEPP15144 967 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 ZNF250P15622 560 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 BGNP21810 368 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 GTF2E2P29084 291 aaKnown RBP12.12□□□□□ -0.47
NFE4-201ENST00000420058 CCL8P80075 99 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 CAMK2DQ13557 499 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 GKAP1Q5VSY0 366 aaPredicted RBP12.12□□□□□ -0.47
NFE4-201ENST00000420058 UEVLDQ8IX04 471 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 C22orf15Q8WYQ4 148 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.12□□□□□ -0.47
NFE4-201ENST00000420058 GTF3AQ92664 365 aaKnown RBP12.12□□□□□ -0.47
NFE4-201ENST00000420058 SLC38A4Q969I6 547 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 MAL2Q969L2 176 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 LRRC58Q96CX6 371 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 MOGAT1Q96PD6 335 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 FOXB1Q99853 325 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 WFDC6Q9BQY6 131 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 C1QTNF5Q9BXJ0 243 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 WDR55Q9H6Y2 383 aaPredicted RBP12.12□□□□□ -0.47
NFE4-201ENST00000420058 HINT3Q9NQE9 182 aaKnown RBP12.12□□□□□ -0.47
NFE4-201ENST00000420058 TAAR3PQ9P1P4 343 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 ZNF346Q9UL40 294 aaKnown RBP12.12□□□□□ -0.47
NFE4-201ENST00000420058 NOX1Q9Y5S8 564 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
NFE4-201ENST00000420058 A0A0G2JMP0 313 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 A0A0X1KG70 313 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 LRRN3E7EW58 273 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 J3QLI3 93 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 AKAP8O43823 692 aaKnown RBP12.11□□□□□ -0.47
NFE4-201ENST00000420058 TPST1O60507 370 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 TPST2O60704 377 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 BMP2P12643 396 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 EPHA3P29320 983 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 ERVS71-1P61550 626 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 RPS23P62266 143 aaKnown RBP12.11□□□□□ -0.47
NFE4-201ENST00000420058 DEFA6Q01524 100 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 GLIPR1L2Q4G1C9 344 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 LRFN4Q6PJG9 635 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 SHISA2Q6UWI4 295 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 OR4M2Q8NGB6 313 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 OR6S1Q8NH40 331 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 NANPQ8TBE9 248 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 C1orf147Q96MC9 270 aaPredicted RBP12.11□□□□□ -0.47
NFE4-201ENST00000420058 NKIRAS2Q9NYR9 191 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 SLC7A8Q9UHI5 535 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 WIPI2Q9Y4P8 454 aa12.11□□□□□ -0.47
NFE4-201ENST00000420058 A0A1W2PPW3 197 aa12.1□□□□□ -0.47
NFE4-201ENST00000420058 PLPP3O14495 311 aa12.1□□□□□ -0.47
NFE4-201ENST00000420058 UBL3O95164 117 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms