RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PAMR1Q6UXH9 720 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 NET1Q7Z628 596 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 PTOV1Q86YD1 416 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 GABRG1Q8N1C3 465 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 OR2C3Q8N628 320 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 C11orf65Q8NCR3 313 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 PIGXQ8TBF5 258 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 C10orf82Q8WW14 230 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 SLC35B4Q969S0 331 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 C3orf49Q96BT1 292 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 ZC3HAV1LQ96H79 300 aaKnown RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF317Q96PQ6 595 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF607Q96SK3 696 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 SPATA5L1Q9BVQ7 753 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 RSPO3Q9BXY4 272 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 ACTR6Q9GZN1 396 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 KAT8Q9H7Z6 458 aaKnown RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 MRGBPQ9NV56 204 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF226Q9NYT6 803 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 EMC3Q9P0I2 261 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 PRDM4Q9UKN5 801 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 TRAPPC4Q9Y296 219 aa6.11□□□□□ -1.43
HMGN1-205ENST00000419378 ZNF469Q96JG9 3925 aaPredicted RBP6.11□□□□□ -1.43
HMGN1-205ENST00000419378 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 PRORSD1PA6NEY8 169 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 LIPT2A6NK58 231 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 BBIP1A8MTZ0 92 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 A8MVM7 634 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 GPR171O14626 319 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 ATP8B1O43520 1251 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 TPST1O60507 370 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 EIF1BO60739 113 aaKnown RBP6.1□□□□□ -1.43
HMGN1-205ENST00000419378 NPIPB7O75200 414 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 SERPINB7O75635 380 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 ADAP00813 363 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 GPIP06744 558 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 LOXP28300 417 aaPredicted RBP6.1□□□□□ -1.43
HMGN1-205ENST00000419378 PCGF2P35227 344 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 IST1P53990 364 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 RGS8P57771 180 aaPredicted RBP6.1□□□□□ -1.43
HMGN1-205ENST00000419378 MXRA7P84157 204 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 DMTNQ08495 405 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 RBBP4Q09028 425 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 RAB32Q13637 225 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 CEACAM7Q14002 265 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 MAPRE2Q15555 327 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 OR7A5Q15622 319 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 TSC22D1Q15714 1073 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 GLIPR1L2Q4G1C9 344 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 FAM209BQ5JX69 171 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 C1orf140Q5VVS0 124 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 REP15Q6BDI9 236 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 NANOGP8Q6NSW7 305 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 PAQR6Q6TCH4 344 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 C6orf89Q6UWU4 347 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 Q6ZT83 130 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 GALNT5Q7Z7M9 940 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 SNX32Q86XE0 403 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 ARMC8Q8IUR7 673 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 STEAP2Q8NFT2 490 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 OR8J3Q8NGG0 315 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 OR10A6Q8NH74 314 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 APH1AQ96BI3 265 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 S100PBPQ96BU1 408 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 LRRC58Q96CX6 371 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 PIK3IP1Q96FE7 263 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 ARPC5LQ9BPX5 153 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 POTEKPQ9BYX7 375 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 OR10A4Q9H209 315 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 PLEKHF2Q9H8W4 249 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 NANOGQ9H9S0 305 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 ARMCX1Q9P291 453 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 TESQ9UGI8 421 aaKnown RBP6.1□□□□□ -1.43
HMGN1-205ENST00000419378 PLEKHA6Q9Y2H5 1048 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 GPR52Q9Y2T5 361 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 NOSIPQ9Y314 301 aaKnown RBP6.1□□□□□ -1.43
HMGN1-205ENST00000419378 CAPN7Q9Y6W3 813 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 ITPR3Q14573 2671 aa6.1□□□□□ -1.43
HMGN1-205ENST00000419378 PRR14LQ5THK1 2151 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 IGKV1D-42A0A075B6H8 117 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 A0A087WWL8 130 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.09□□□□□ -1.43
HMGN1-205ENST00000419378 A0A1B0GWA3 101 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 AQP7P3A6NL99 342 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 FTCDNL1E5RQL4 147 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 M0R3H8 397 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 MRASO14807 208 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 SLC22A2O15244 555 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 TPST2O60704 377 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 LYZL6O75951 148 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 SCAF4O95104 1147 aaKnown RBP6.09□□□□□ -1.43
HMGN1-205ENST00000419378 MFN2O95140 757 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 AKR7A3O95154 331 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 AHSA1O95433 338 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 IGHV3-9P01782 118 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 OPN1SWP03999 348 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 COX5AP20674 150 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 IGHV1-2P23083 117 aa6.09□□□□□ -1.43
HMGN1-205ENST00000419378 IL32P24001 234 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms