RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 MELKQ14680 651 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 INAQ16352 499 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ACKR1Q16570 336 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TIGD6Q17RP2 521 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TMEM176BQ3YBM2 270 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TIMM50Q3ZCQ8 353 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 WIPI1Q5MNZ9 446 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 EEF1A1P5Q5VTE0 462 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 UBE2UQ5VVX9 321 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 C1QL3Q5VWW1 255 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 XAF1Q6GPH4 301 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SPINK14Q6IE38 97 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LYPD4Q6UWN0 246 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LRRC69Q6ZNQ3 347 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TMPPEQ6ZT21 453 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SLC35D2Q76EJ3 337 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 MEPCEQ7L2J0 689 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 FAM220AQ7Z4H9 259 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 BCDIN3DQ7Z5W3 292 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 GPAT4Q86UL3 456 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 P2RY8Q86VZ1 359 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LSRQ86X29 649 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 CLVS1Q8IUQ0 354 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SULF2Q8IWU5 870 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SPACA3Q8IXA5 215 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 KLHL36Q8N4N3 616 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ARIH2OSQ8N7S6 290 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LRRC75AQ8NAA5 344 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 FDCSPQ8NFU4 85 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 OR10H4Q8NGA5 316 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 OR52I1Q8NGK6 324 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 OR2V1Q8NHB1 315 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF420Q8TAQ5 688 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF519Q8TB69 540 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 RAB2BQ8WUD1 216 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 FAR1Q8WVX9 515 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ASB10Q8WXI3 467 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 GGHQ92820 318 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 KISS1RQ969F8 398 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 UBE2FQ969M7 185 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 RELTQ969Z4 430 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 CPNE4Q96A23 557 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF524Q96C55 264 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 LGALS12Q96DT0 336 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 UBL7Q96S82 380 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 NMNAT3Q96T66 252 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 NPAS1Q99742 590 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 BCL7BQ9BQE9 202 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ALG12Q9BV10 488 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 JAM3Q9BX67 310 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 CDCA4Q9BXL8 241 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 HES7Q9BYE0 225 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 OR51V1Q9H2C8 321 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SLC6A15Q9H2J7 730 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF552Q9H707 407 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 EXO5Q9H790 373 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 MED20Q9H944 212 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 FGF20Q9NP95 211 aaPredicted RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TIGARQ9NQ88 270 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 RPRD1BQ9NQG5 326 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 ASB6Q9NWX5 421 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TAS2R16Q9NYV7 291 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TNFRSF10DQ9UBN6 386 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 DKK4Q9UBT3 224 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 SEC14L4Q9UDX3 406 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 RSL24D1Q9UHA3 163 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 TRAPPC4Q9Y296 219 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 MRPS18CQ9Y3D5 142 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 PCDHGB7Q9Y5F8 929 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 PCDHGA9Q9Y5G4 932 aaKnown RBP5.35□□□□□ -1.55
HMGB3-202ENST00000419110 KCNMB2Q9Y691 235 aa5.35□□□□□ -1.55
HMGB3-202ENST00000419110 AKAP13Q12802 2813 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PRSS37A4D1T9 235 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 A6NHS1 94 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 C12orf71A8MTZ7 269 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 CENPBD1B2RD01 187 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF701M0R085 212 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 TNFSF11O14788 317 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PHYHO14832 338 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ARHGEF9O43307 516 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 TRAF3IP2O43734 574 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 AHCYL1O43865 530 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 SEC14L2O76054 403 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 GLCEO94923 617 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 GLSO94925 669 aaPredicted RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 SYNGR4O95473 234 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 BCL10O95999 233 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PTHP01270 115 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 IGHA1P01876 353 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 GYPBP06028 91 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 LCKP06239 509 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 MRPL3P09001 348 aaKnown RBP5.34□□□□□ -1.55
HMGB3-202ENST00000419110 SBK2P0C263 348 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 HSMCR30P0CW71 290 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 FCGR2AP12318 317 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 IFNGR1P15260 489 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ZNF43P17038 809 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 PCMT1P22061 227 aa5.34□□□□□ -1.55
HMGB3-202ENST00000419110 ENPP1P22413 925 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms