RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 RAD51DO75771 328 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 OR6A2O95222 327 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 HOXB6P17509 224 aaKnown RBP16.38■□□□□ 0.21
PTCD3-204ENST00000418628 IL1RL1Q01638 556 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 CHRNB3Q05901 458 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 FAM98BQ52LJ0 330 aaKnown RBP16.38■□□□□ 0.21
PTCD3-204ENST00000418628 TIMM23BQ5SRD1 257 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 C1QTNF12Q5T7M4 302 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 SSX8Q7RTT4 187 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 ABHD12BQ7Z5M8 362 aaPredicted RBP16.38■□□□□ 0.21
PTCD3-204ENST00000418628 OR52J3Q8NH60 311 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 CANT1Q8WVQ1 401 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 ASB10Q8WXI3 467 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 FAM46AQ96IP4 442 aaKnown RBP16.38■□□□□ 0.21
PTCD3-204ENST00000418628 LRGUKQ96M69 825 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 VNN3Q9NY84 501 aa16.38■□□□□ 0.21
PTCD3-204ENST00000418628 TRAV27A0A087WT01 109 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 DHRS12A0PJE2 317 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 CENPBD1B2RD01 187 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 KRT36O76013 467 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 PGA4P0DJD7 388 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 PGA3P0DJD8 388 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 SAGP10523 405 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-204ENST00000418628 BIDP55957 195 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 FXYD6P3P58550 94 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 STK11Q15831 433 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 HIST3H3Q16695 136 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 ARMC4Q5T2S8 1044 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 OR7E24Q6IFN5 339 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 ZNF770Q6IQ21 691 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-204ENST00000418628 ZNF627Q7L945 461 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 ZER1Q7Z7L7 766 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 PAPD5Q8NDF8 572 aaKnown RBP16.37■□□□□ 0.21
PTCD3-204ENST00000418628 HSD17B8Q92506 261 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 TMEM54Q969K7 222 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 ZNF837Q96EG3 531 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-204ENST00000418628 ALPK1Q96QP1 1244 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 GPX7Q96SL4 187 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-204ENST00000418628 GPA33Q99795 319 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 MRPL13Q9BYD1 178 aaKnown RBP16.37■□□□□ 0.21
PTCD3-204ENST00000418628 GPR35Q9HC97 309 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 INIPQ9NRY2 104 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 SIGLEC7Q9Y286 467 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 SLC25A15Q9Y619 301 aa16.37■□□□□ 0.21
PTCD3-204ENST00000418628 PTP4A3O75365 173 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 SERPINI2O75830 405 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 STAMBPO95630 424 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 F13BP05160 661 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 ZNF133P52736 654 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 SH3BGRP55822 239 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 CBX1P83916 185 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 ROR2Q01974 943 aaKnown RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 CAMK2DQ13557 499 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 MELKQ14680 651 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 LAPTM4AQ15012 233 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 TAF11Q15544 211 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 ACKR1Q16570 336 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 ALG10Q5BKT4 473 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 OAFQ86UD1 273 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 WDR31Q8NA23 367 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 OR1K1Q8NGR3 316 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 MAGEE2Q8TD90 523 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 UTP4Q969X6 686 aaKnown RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 NMD3Q96D46 503 aaKnown RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 SLC25A44Q96H78 314 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 ZC3HAV1LQ96H79 300 aaKnown RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 TXNIPQ9H3M7 391 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 SLC17A5Q9NRA2 495 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 NPAP1Q9NZP6 1156 aa16.36■□□□□ 0.21
PTCD3-204ENST00000418628 PRRC2AP48634 2157 aaKnown RBP16.36■□□□□ 0.21
PTCD3-204ENST00000418628 CHD3Q12873 2000 aaKnown RBP16.35■□□□□ 0.21
PTCD3-204ENST00000418628 A0A1W2PRG6 482 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 FPR3P25089 353 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 GSSP48637 474 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 DAP3P51398 398 aaKnown RBP16.35■□□□□ 0.21
PTCD3-204ENST00000418628 PRPS1P60891 318 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 TGFBR3Q03167 851 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 RUNX1T1Q06455 604 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 GK3PQ14409 553 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 ZBED5Q49AG3 693 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 BEX5Q5H9J7 111 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 C9orf135Q5VTT2 229 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 OR2T5Q6IEZ7 315 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 C1orf94Q6P1W5 598 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 PGBD2Q6P3X8 592 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 RRM2BQ7LG56 351 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 CDK20Q8IZL9 346 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 NOXO1Q8NFA2 376 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 OR2T29Q8NH02 315 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 ZNF519Q8TB69 540 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 SLCO4A1Q96BD0 722 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 RSRC1Q96IZ7 334 aaKnown RBP16.35■□□□□ 0.21
PTCD3-204ENST00000418628 LURAP1Q96LR2 239 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 TNFRSF13CQ96RJ3 184 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 TMEM204Q9BSN7 226 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 CRLF2Q9HC73 371 aa16.35■□□□□ 0.21
PTCD3-204ENST00000418628 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
PTCD3-204ENST00000418628 ARFGEF3Q5TH69 2177 aa16.34■□□□□ 0.21
PTCD3-204ENST00000418628 ARPC4-TTLL3A0A0A6YYG9 625 aa16.34■□□□□ 0.21
PTCD3-204ENST00000418628 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms