RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 MEGF11A6BM72 1044 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 ZNF891A8MT65 544 aaPredicted RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 CDX4O14627 284 aaPredicted RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 LRRTM2O43300 516 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 KLF7O75840 302 aaPredicted RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 SLC2A10O95528 541 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 UMODP07911 640 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 SPARCP09486 303 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 FTH1P19P0C7X4 201 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 ENPP1P22413 925 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 CSNK1A1P48729 337 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 ADAM8P78325 824 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 SLC3A1Q07837 685 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 FCRLBQ6BAA4 426 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 OR5M10Q6IEU7 315 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 PAQR6Q6TCH4 344 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 NDNFQ8TB73 568 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 DYNC2LI1Q8TCX1 351 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 RASD2Q96D21 266 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 NAA50Q9GZZ1 169 aaKnown RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 CLEC2DQ9UHP7 191 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 LIPT2A6NK58 231 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 CENPXA8MT69 81 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 OIP5O43482 229 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 FARS2O95363 451 aaKnown RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 H2BFMP0C1H6 154 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 LIMS3P0CW19 117 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 LIMS4P0CW20 117 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 LIFP15018 202 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 TGFBR2P37173 567 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 GDI2P50395 445 aaKnown RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 PPP5CP53041 499 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 ARG2P78540 354 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 EEF1A1P5Q5VTE0 462 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 MZT2BQ6NZ67 158 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 DEGS2Q6QHC5 323 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 ESPNLQ6ZVH7 1005 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 ABHD12BQ7Z5M8 362 aaPredicted RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 CEACAM19Q7Z692 300 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 GPAT4Q86UL3 456 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 NPEPL1Q8NDH3 523 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 OR5AK2Q8NH90 309 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 TSEN15Q8WW01 171 aaKnown RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 MED20Q9H944 212 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 ZFP64Q9NPA5 681 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 TXNL4BQ9NX01 149 aaKnown RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 VSX1Q9NZR4 365 aaPredicted RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 ZNF281Q9Y2X9 895 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 IGKV1D-42A0A075B6H8 117 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 A0A1W2PNV4 684 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 APOL3O95236 402 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 RAF1P04049 648 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 CEACAM1P13688 526 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 OR2G6Q5TZ20 316 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 C22orf42Q6IC83 251 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 APOOLQ6UXV4 268 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 SLC16A12Q6ZSM3 486 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 SGCDQ92629 289 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 CPNE2Q96FN4 548 aaPredicted RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 ADGRL4Q9HBW9 690 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 LSM2Q9Y333 95 aaKnown RBP7.58□□□□□ -1.2
USP54-203ENST00000418501 CABIN1Q9Y6J0 2220 aa7.58□□□□□ -1.2
USP54-203ENST00000418501 SNRNP200O75643 2136 aaKnown RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 SLC43A1O75387 559 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 PLGP00747 810 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 LIPCP11150 499 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 HSD11B1P28845 292 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TRILQ7L0X0 811 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 BCDIN3DQ7Z5W3 292 aaKnown RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 GLB1L2Q8IW92 636 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 LRRC17Q8N6Y2 441 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 FADS6Q8N9I5 356 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TBC1D15Q8TC07 691 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 GPR148Q8TDV2 347 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TMEM203Q969S6 136 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 MOB1AQ9H8S9 216 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 DAPK2Q9UIK4 370 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 B9D1Q9UPM9 204 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 ADAM18Q9Y3Q7 739 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 IQCMA0A1B0GVH7 501 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 ETV2O00321 342 aaPredicted RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 GABRPO00591 440 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 HRGP04196 525 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 SFTPDP35247 375 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 CD97P48960 835 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 DNASE1L1P49184 302 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 NOVA1P51513 510 aaKnown RBP7.57□□□□□ -1.2
USP54-203ENST00000418501 CARD18P57730 90 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 PCBD1P61457 104 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 SCN1BQ07699 218 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 CBX3Q13185 183 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 CDONQ4KMG0 1287 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 DCAF10Q5QP82 559 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TMEM244Q5VVB8 128 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 OR8H2Q8N162 312 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TEX19Q8NA77 164 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 BBS1Q8NFJ9 593 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 DIRAS2Q96HU8 199 aa7.57□□□□□ -1.2
USP54-203ENST00000418501 TSPAN32Q96QS1 320 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms