RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IL20Q9NYY1 176 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 GALPQ9UBC7 116 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 UXTQ9UBK9 157 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF225Q9UK10 706 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 TBC1D24Q9ULP9 559 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SNX6Q9UNH7 406 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 DUSP12Q9UNI6 340 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SSR3Q9UNL2 185 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PIN4Q9Y237 131 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 DHRS7Q9Y394 339 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SAMHD1Q9Y3Z3 626 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 NEUROG3Q9Y4Z2 214 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OARD1Q9Y530 152 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 TIMM22Q9Y584 194 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 COL4A5P29400 1685 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 NLRC5Q86WI3 1866 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF106Q9H2Y7 1883 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 CHD5Q8TDI0 1954 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OTOFQ9HC10 1997 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ANKRD12Q6UB98 2062 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 TDRD15B5MCY1 1934 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 A0A087WV48 116 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TRBV5-5A0A0J9YX44 114 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 LOC100506127A0A0U1RQW1 187 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 LOC105371267A0A1B0GV96 52 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 A0A1W2PQ72 361 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MYBPHLA2RUH7 354 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MBLAC1A4D2B0 266 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 LINC00862A6NCI5 91 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 FABP12A6NFH5 140 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR51F1A6NGY5 319 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NCF1BA6NI72 391 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR6C70A6NIJ9 312 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ZSCAN5BA6NJL1 495 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SNTNA6NMZ2 147 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 A8MU76 341 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NCF1CA8MVU1 366 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 SNURFLB1AK76 121 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 B4DXG7 233 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 M0QZ92 97 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TNFRSF11BO00300 401 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MANBAO00462 879 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR7A17O14581 309 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RFXANKO14593 260 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SLC30A4O14863 429 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TFECO14948 347 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 TEX28O15482 410 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RGS5O15539 181 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 HCRTO43612 131 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PRKYO43930 277 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SLC19A2O60779 497 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MTRF1O75570 445 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 CNMDO75829 334 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR2B3O76000 313 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 KRT33AO76009 404 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CCNB2O95067 398 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 GAS8-AS1O95177 125 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CLDN9O95484 217 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 GBAP04062 536 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PGK2P07205 417 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ANXA5P08758 320 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 BCKDHAP12694 445 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SPNP16150 400 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ZNF30P17039 623 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 EPORP19235 508 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 GALP22466 123 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PRKACGP22612 351 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PRKACBP22694 351 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 IL32P24001 234 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PRDX3P30048 256 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 SDC2P34741 201 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 HTR2BP41595 481 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ASMTP46597 345 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TUFMP49411 452 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 HNMTP50135 292 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CRYBB1P53674 252 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 PAX9P55771 341 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SMIM11AP58511 58 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SNRPGP62308 76 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 BTG1P62324 171 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PPP3R1P63098 170 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SELENOWP63302 87 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CACNG1Q06432 222 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SLC10A7Q0GE19 358 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ST3GAL4Q11206 333 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MLLT11Q13015 90 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 DMC1Q14565 340 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ABRAXAS2Q15018 415 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NCF4Q15080 339 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ZNF74Q16587 644 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MICAQ29983 383 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TMEM44Q2T9K0 475 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 GLYR1Q49A26 553 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 GPR33Q49SQ1 333 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 IQCCQ4KMZ1 466 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RFTN2Q52LD8 501 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 IFI44LQ53G44 452 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 KLHL12Q53G59 568 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CARD16Q5EG05 197 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MS4A13Q5J8X5 152 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms