RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 DIRAS1O95057 198 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 OR6A2O95222 327 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 UMPSP11172 480 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 IFI30P13284 250 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 MAKP20794 623 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 RPS4XP62701 263 aaKnown RBP9.23□□□□□ -0.93
RFC1-203ENST00000418436 IL1RL1Q01638 556 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 RPL18Q07020 188 aaKnown RBP9.23□□□□□ -0.93
RFC1-203ENST00000418436 TRAP1Q12931 704 aaKnown RBP9.23□□□□□ -0.93
RFC1-203ENST00000418436 FOXD4Q12950 439 aaPredicted RBP9.23□□□□□ -0.93
RFC1-203ENST00000418436 FHL1Q13642 323 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 DNAL1Q4LDG9 190 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 BEX5Q5H9J7 111 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 C1QTNF12Q5T7M4 302 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 PODNL1Q6PEZ8 512 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 TBPL2Q6SJ96 375 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 TMPRSS11FQ6ZWK6 438 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 SLC35D2Q76EJ3 337 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 NANOGNBQ7Z5D8 188 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 ABHD12BQ7Z5M8 362 aaPredicted RBP9.23□□□□□ -0.93
RFC1-203ENST00000418436 DHFR2Q86XF0 187 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 WFDC8Q8IUA0 241 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 C20orf196Q8IYI0 205 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 C17orf78Q8N4C9 275 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 POP5Q969H6 163 aaKnown RBP9.23□□□□□ -0.93
RFC1-203ENST00000418436 LRR1Q96L50 414 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 EMC6Q9BV81 110 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 PLEKHF2Q9H8W4 249 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 MED29Q9NX70 200 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 HIF3AQ9Y2N7 669 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 CSMD2Q7Z408 3487 aa9.23□□□□□ -0.93
RFC1-203ENST00000418436 TRBV4-1A0A0J9YWV2 114 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.22□□□□□ -0.93
RFC1-203ENST00000418436 CIB4A0PJX0 185 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 NPIPB13A6NJU9 1138 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 NPIPB4C9JG80 1138 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 ZNF587BE7ETH6 402 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 BLOC1S5-TXNDC5H3BN57 136 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 RNF13O43567 381 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 FABP3P05413 133 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 IFNGR1P15260 489 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 AQP2P41181 271 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 MAGEA2P43356 314 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 SLC9A3P48764 834 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 TGFBR3Q03167 851 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 PPA1Q15181 289 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 SWI5Q1ZZU3 235 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 ANKDD1AQ495B1 522 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 PHYHD1Q5SRE7 291 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 ZNF730Q6ZMV8 503 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 WDR31Q8NA23 367 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 LRRC75AQ8NAA5 344 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 OR6X1Q8NH79 312 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 MOSPD2Q8NHP6 518 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 MCUR1Q96AQ8 359 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 PIK3IP1Q96FE7 263 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 ADAD1Q96M93 576 aaKnown RBP9.22□□□□□ -0.93
RFC1-203ENST00000418436 ALKBH3Q96Q83 286 aaPredicted RBP9.22□□□□□ -0.93
RFC1-203ENST00000418436 ZNF347Q96SE7 839 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 TMEM204Q9BSN7 226 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 MAGIXQ9H6Y5 334 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 GPR35Q9HC97 309 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 SLC17A5Q9NRA2 495 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 SLC25A15Q9Y619 301 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 ABCA4P78363 2273 aa9.22□□□□□ -0.93
RFC1-203ENST00000418436 TEX15Q9BXT5 2789 aa9.21□□□□□ -0.93
RFC1-203ENST00000418436 NAV2Q8IVL1 2488 aa9.21□□□□□ -0.93
RFC1-203ENST00000418436 SH3PXD2BA1X283 911 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 ZNF726A6NNF4 738 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 EFCAB9A8MZ26 197 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 CDC42EP2O14613 210 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 GSC2O15499 205 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 SERPINI2O75830 405 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 DNAJC8O75937 253 aaPredicted RBP9.21□□□□□ -0.94
RFC1-203ENST00000418436 ATP5HO75947 161 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 KRT33AO76009 404 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 F13BP05160 661 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 OMPP47874 163 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 LIMS1P48059 325 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 HMGA2P52926 109 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 NR1H2P55055 460 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 SH3BGRP55822 239 aaPredicted RBP9.21□□□□□ -0.94
RFC1-203ENST00000418436 BIDP55957 195 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 SMIM11AP58511 58 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 ROR2Q01974 943 aaKnown RBP9.21□□□□□ -0.94
RFC1-203ENST00000418436 CAMK2DQ13557 499 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 SEC23BQ15437 767 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 STK11Q15831 433 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 NCMAPQ5T1S8 102 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 C9orf135Q5VTT2 229 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 HMBOX1Q6NT76 420 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 ZNF627Q7L945 461 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 RRM2BQ7LG56 351 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 MEX3DQ86XN8 651 aaKnown RBP9.21□□□□□ -0.94
RFC1-203ENST00000418436 ZDHHC21Q8IVQ6 265 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 CDK20Q8IZL9 346 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 GPR137CQ8N3F9 429 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 OR4K5Q8NGD3 323 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 OR1K1Q8NGR3 316 aa9.21□□□□□ -0.94
RFC1-203ENST00000418436 MAGEE2Q8TD90 523 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms