RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PYURFQ96I23 114 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 ZNF385AQ96PM9 386 aaKnown RBP15.72■□□□□ 0.11
VCP-202ENST00000417448 TMEM43Q9BTV4 400 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 BCO1Q9HAY6 547 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 MAN2C1Q9NTJ4 1040 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 FAIMQ9NVQ4 179 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 KCNS2Q9ULS6 477 aa15.72■□□□□ 0.11
VCP-202ENST00000417448 MS4A18H0YCH9 400 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 DNPH1O43598 174 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 HPRP00739 348 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 MT-ND1P03886 318 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 EGR1P18146 543 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 FUT1P19526 365 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 IL32P24001 234 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 GTF2E2P29084 291 aaKnown RBP15.71■□□□□ 0.11
VCP-202ENST00000417448 ERFP50548 548 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 LGALS3BPQ08380 585 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 SLC17A1Q14916 467 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 MS4A18Q3C1V0 323 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 SWT1Q5T5J6 900 aaKnown RBP15.71■□□□□ 0.11
VCP-202ENST00000417448 FAM69AQ5T7M9 428 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 AGAP6Q5VW22 663 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 FAM166AQ6J272 317 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 TFAP2EQ6VUC0 442 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 GALNT5Q7Z7M9 940 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 OR9K2Q8NGE7 335 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 FAM168AQ92567 244 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 MSI2Q96DH6 328 aaKnown RBP15.71■□□□□ 0.11
VCP-202ENST00000417448 C7orf34Q96L11 122 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 PRRC1Q96M27 445 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 ADAD1Q96M93 576 aaKnown RBP15.71■□□□□ 0.11
VCP-202ENST00000417448 SEPHS2Q99611 448 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 BTBD10Q9BSF8 475 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 FNDC11Q9BVV2 318 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 HDHD5Q9BXW7 423 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 C1orf21Q9H246 121 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 C20orf141Q9NUB4 165 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 NDUFAF4Q9P032 175 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 PRPF19Q9UMS4 504 aaKnown RBP15.71■□□□□ 0.11
VCP-202ENST00000417448 SAMD4AQ9UPU9 718 aaKnown RBP15.71■□□□□ 0.11
VCP-202ENST00000417448 NOSIPQ9Y314 301 aaKnown RBP15.71■□□□□ 0.11
VCP-202ENST00000417448 FLVCR1Q9Y5Y0 555 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 ENPP4Q9Y6X5 453 aa15.71■□□□□ 0.11
VCP-202ENST00000417448 IGKV3D-15A0A087WSY6 115 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 ZNF724A8MTY0 619 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 SERPINI2O75830 405 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 PRSS23O95084 383 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 HLA-DOBP13765 273 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 ITGA2P17301 1181 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 USF1P22415 310 aaPredicted RBP15.7■□□□□ 0.1
VCP-202ENST00000417448 FOXG1P55316 489 aaPredicted RBP15.7■□□□□ 0.1
VCP-202ENST00000417448 TRIM25Q14258 630 aaKnown RBP15.7■□□□□ 0.1
VCP-202ENST00000417448 C12orf54Q6X4T0 127 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 DHFR2Q86XF0 187 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 ZNF100Q8IYN0 542 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 TMEM239Q8WW34 195 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 EPYCQ99645 322 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 CADM1Q9BY67 442 aaKnown RBP15.7■□□□□ 0.1
VCP-202ENST00000417448 ACTR3BQ9P1U1 418 aa15.7■□□□□ 0.1
VCP-202ENST00000417448 LOC100289279A0A1B0GTE1 492 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 TCRBV5S2A0A599 114 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 C11orf98E9PRG8 122 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 GSC2O15499 205 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 OR2T1O43869 369 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 ADAP00813 363 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 SEMG1P04279 462 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 NQO1P15559 274 aaKnown RBP15.69■□□□□ 0.1
VCP-202ENST00000417448 OR3A2P47893 321 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 GZMKP49863 264 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 SLC16A1P53985 500 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 PMS2P3Q13401 168 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 P2RY6Q15077 328 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 PDK3Q15120 406 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 ZNF74Q16587 644 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 IQCCQ4KMZ1 466 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 CASP12Q6UXS9 341 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 H1FNTQ75WM6 255 aaPredicted RBP15.69■□□□□ 0.1
VCP-202ENST00000417448 EPHX4Q8IUS5 362 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 WDFY1Q8IWB7 410 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 OR52J3Q8NH60 311 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 MPP4Q96JB8 637 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 ZNF426Q9BUY5 554 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 NPAP1Q9NZP6 1156 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 EMC3Q9P0I2 261 aa15.69■□□□□ 0.1
VCP-202ENST00000417448 E7EQL1 145 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 ABCD4O14678 606 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 TCF21O43680 179 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 DNAJC8O75937 253 aaPredicted RBP15.68■□□□□ 0.1
VCP-202ENST00000417448 LY6HO94772 140 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 UMPSP11172 480 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 TTKP33981 857 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 ST3GAL3Q11203 375 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 TRAM2Q15035 370 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 SPATS1Q496A3 300 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 C9orf135Q5VTT2 229 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 PGM2L1Q6PCE3 622 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 CREB3L2Q70SY1 520 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 SLC46A3Q7Z3Q1 461 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 OFCC1Q8IZS5 231 aa15.68■□□□□ 0.1
VCP-202ENST00000417448 ARHGAP24Q8N264 748 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms