RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PLPP3O14495 311 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 HLA-DOBP13765 273 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 CHRFAM7AQ494W8 412 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 RABL3Q5HYI8 236 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 CYB5R2Q6BCY4 276 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 TTC33Q6PID6 262 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-208ENST00000417285 CALHM3Q86XJ0 350 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 PCYOX1LQ8NBM8 494 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 OR5J2Q8NH18 312 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 VRK1Q99986 396 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-208ENST00000417285 ZNF442Q9H7R0 627 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 STAB1Q9NY15 2570 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 DNHD1Q96M86 4753 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 LRRN3E7EW58 273 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 FXYD1O00168 92 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 AHCYP23526 432 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 CALCRP30988 508 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 IDH3GP51553 393 aaPredicted RBP21.97■■□□□ 1.11
VEGFA-208ENST00000417285 C6orf52Q5T4I8 152 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 CARD17Q5XLA6 110 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 ERICH5Q6P6B1 374 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 PODNL1Q6PEZ8 512 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 VHLLQ6RSH7 139 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 ZNF627Q7L945 461 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 RBM45Q8IUH3 476 aaKnown RBP21.97■■□□□ 1.11
VEGFA-208ENST00000417285 OR4D11Q8NGI4 311 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 TXNDC15Q96J42 360 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 MPP4Q96JB8 637 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 EMC6Q9BV81 110 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 RAB1BQ9H0U4 201 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 PCDHAC1Q9H158 963 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 GID8Q9NWU2 228 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 SLC7A7Q9UM01 511 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 POFUT2Q9Y2G5 429 aa21.97■■□□□ 1.11
VEGFA-208ENST00000417285 LOC390937A0A1W2PQ73 354 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 OR6A2O95222 327 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 NPR2P20594 1047 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 CAPZA2P47755 286 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 PPOXP50336 477 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 LSM11P83369 360 aaKnown RBP eCLIP21.96■■□□□ 1.112e-28■□□□□ 11.1
VEGFA-208ENST00000417285 GUCY1A3Q02108 690 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 HGFACQ04756 655 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 PHYHD1Q5SRE7 291 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 ZNF540Q8NDQ6 660 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 OR6N1Q8NGY5 312 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 SORCS2Q96PQ0 1159 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 PIMREGQ9BSJ6 248 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 DENND2DQ9H6A0 471 aaPredicted RBP21.96■■□□□ 1.11
VEGFA-208ENST00000417285 CCDC134Q9H6E4 229 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 TMEM160Q9NX00 188 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 MED29Q9NX70 200 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 B3GNT2Q9NY97 397 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 CDC42EP3Q9UKI2 254 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 BAG5Q9UL15 447 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 ARFGEF3Q5TH69 2177 aa21.96■■□□□ 1.11
VEGFA-208ENST00000417285 IGHV2OR16-5A0A0B4J2B6 119 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 VWC2LB2RUY7 222 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 LY6HO94772 140 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 ERCC1P07992 297 aaPredicted RBP21.95■■□□□ 1.1
VEGFA-208ENST00000417285 ADORA3P0DMS8 318 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 THBS4P35443 961 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 WDR88Q6ZMY6 472 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 MDP1Q86V88 176 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 SPATA3Q8NHX4 192 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 KCNK17Q96T54 332 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 SLC19A3Q9BZV2 496 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 SEC61A2Q9H9S3 476 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 CAPN7Q9Y6W3 813 aa21.95■■□□□ 1.1
VEGFA-208ENST00000417285 ANK3Q12955 4377 aaKnown RBP21.94■■□□□ 1.1
VEGFA-208ENST00000417285 LOC100653049A0A140TA62 436 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 SERPINI2O75830 405 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 KRT34O76011 436 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 LYPD3O95274 346 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 IFNA14P01570 189 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 THY1P04216 161 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 CELA3BP08861 270 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 GZMKP49863 264 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 CRYBA2P53672 197 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 NPRL3Q12980 569 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 ZNF74Q16587 644 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 ZNF813Q6ZN06 617 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 NANSQ9NR45 359 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 SH3GLB1Q9Y371 365 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 SPEF1Q9Y4P9 236 aa21.94■■□□□ 1.1
VEGFA-208ENST00000417285 C11orf98E9PRG8 122 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 SLC22A2O15244 555 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 CH25HO95992 272 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 NR4A2P43354 598 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 ZP4Q12836 540 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 CAMK2DQ13557 499 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 DAG1Q14118 895 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 GSG1Q2KHT4 349 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 CXXC5Q7LFL8 322 aaKnown RBP21.93■■□□□ 1.1
VEGFA-208ENST00000417285 CARM1Q86X55 608 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 ZNF583Q96ND8 569 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 FOXN4Q96NZ1 517 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 DOK1Q99704 481 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 ULBP2Q9BZM5 246 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 MED4Q9NPJ6 270 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 ZNF229Q9UJW7 825 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms