RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 NPIPB4C9JG80 1138 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 RPL36A-HNRNPH2H7BZ11 118 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 CIB2O75838 187 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 PRF1P14222 555 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 RPS4XP62701 263 aaKnown RBP20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 ROR2Q01974 943 aaKnown RBP20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 CAMK2DQ13557 499 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 GK3PQ14409 553 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 STK11Q15831 433 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 C9orf135Q5VTT2 229 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 ASRGL1Q7L266 308 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 MEX3DQ86XN8 651 aaKnown RBP20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 C17orf78Q8N4C9 275 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 ZNF566Q969W8 418 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 SLC25A44Q96H78 314 aaPredicted RBP20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 LYVE1Q9Y5Y7 322 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 TRAV27A0A087WT01 109 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 OR5H1A6NKK0 313 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 M0R3G1 203 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 GNGT2O14610 69 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 CDC42EP2O14613 210 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 CTAG2O75638 210 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 CST1P01037 141 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 CDH2P19022 906 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 HOXC12P31275 282 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 CSNK1A1P48729 337 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 SH3BGRP55822 239 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 LGALS3BPQ08380 585 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 GABRA6Q16445 453 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 ACKR1Q16570 336 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 C1orf146Q5VVC0 180 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 C22orf34Q6ZV56 151 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 TMEM200AQ86VY9 491 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 WFDC8Q8IUA0 241 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 OR13C2Q8NGS9 318 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 RSRC1Q96IZ7 334 aaKnown RBP20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 ALKBH3Q96Q83 286 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 TXNIPQ9H3M7 391 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 GPR35Q9HC97 309 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 ADGRG4Q8IZF6 3080 aa20.31■□□□□ 0.84
SMARCB1-205ENST00000417137 ITPR2Q14571 2701 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 FAM221AA4D161 298 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 UNC119BA6NIH7 251 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 CENPBD1B2RD01 187 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 CCNB2O95067 398 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 IGHG1P01857 330 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 THBDP07204 575 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 RPL4P36578 427 aaKnown RBP20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 LIMS1P48059 325 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 FOXG1P55316 489 aaPredicted RBP20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 CTXN1P60606 82 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 MELKQ14680 651 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 PPA1Q15181 289 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 TAB1Q15750 504 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 ALKBH2Q6NS38 261 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 ZER1Q7Z7L7 766 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 GNPDA2Q8TDQ7 276 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 BOD1Q96IK1 185 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 CRLF2Q9HC73 371 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 RASSF1Q9NS23 344 aa20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 CCM2LQ9NUG4 571 aaPredicted RBP20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 SAMHD1Q9Y3Z3 626 aaKnown RBP20.3■□□□□ 0.84
SMARCB1-205ENST00000417137 PTP4A3O75365 173 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 BEX5Q5H9J7 111 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 FAM205BPQ63HN1 556 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 C1orf94Q6P1W5 598 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 KLHL24Q6TFL4 600 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 POLDIP3Q9BY77 421 aaKnown RBP20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 ULBP2Q9BZM5 246 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 GLTPQ9NZD2 209 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 SIGLEC7Q9Y286 467 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 FREM1Q5H8C1 2179 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 CENPEQ02224 2701 aa20.29■□□□□ 0.84
SMARCB1-205ENST00000417137 KLF4O43474 513 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 NDUFB2O95178 105 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 NR2C1P13056 603 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 HOXB1P14653 301 aaPredicted RBP20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 ACADSP16219 412 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 PAX7P23759 505 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 FPR3P25089 353 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 NR1H2P55055 460 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 CLRN1P58418 232 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 RPL27P61353 136 aaKnown RBP20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 FHL1Q13642 323 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 CEACAM16Q2WEN9 425 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 ANKRD16Q6P6B7 361 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 LINGO2Q7L985 606 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 LRRC75AQ8NAA5 344 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 PAPD5Q8NDF8 572 aaKnown RBP20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 OR4C15Q8NGM1 316 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 OR1K1Q8NGR3 316 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 ASB10Q8WXI3 467 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 TMEM54Q969K7 222 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 CLEC4MQ9H2X3 399 aaPredicted RBP20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 SLC17A5Q9NRA2 495 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 POFUT2Q9Y2G5 429 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 AMDHD2Q9Y303 409 aa20.28■□□□□ 0.84
SMARCB1-205ENST00000417137 ANKHD1Q8IWZ3 2542 aaKnown RBP20.27■□□□□ 0.84
SMARCB1-205ENST00000417137 A6NIZ1 184 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms