RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TMEM27Q9HBJ8 222 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 B3GAT2Q9NPZ5 323 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 MRPL39Q9NYK5 338 aaKnown RBP12.76□□□□□ -0.37
RPS28-201ENST00000417088 ZNF224Q9NZL3 707 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 SELENONQ9NZV5 590 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 VAPAQ9P0L0 249 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 REV1Q9UBZ9 1251 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 POFUT2Q9Y2G5 429 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 NOX1Q9Y5S8 564 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 GMEB1Q9Y692 573 aa12.76□□□□□ -0.37
RPS28-201ENST00000417088 TRBV5-3A0A0A0MS03 114 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 PRORSD1PA6NEY8 169 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 M0R233 179 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 HAX1O00165 279 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 PLPP3O14495 311 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 B4GALT1P15291 398 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 PPIBP23284 216 aaKnown RBP12.75□□□□□ -0.37
RPS28-201ENST00000417088 GLRXP35754 106 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
RPS28-201ENST00000417088 CDH12P55289 794 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 RGS8P57771 180 aaPredicted RBP12.75□□□□□ -0.37
RPS28-201ENST00000417088 NCALDP61601 193 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 PUDPQ08623 228 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 CAMK2DQ13557 499 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 SCARB2Q14108 478 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 TRMT5Q32P41 509 aaKnown RBP12.75□□□□□ -0.37
RPS28-201ENST00000417088 ELFN2Q5R3F8 820 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 UGT2A3Q6UWM9 527 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 OR6N1Q8NGY5 312 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 SPDL1Q96EA4 605 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 FOXB1Q99853 325 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 SYT3Q9BQG1 590 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 ULBP2Q9BZM5 246 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 TMEM38AQ9H6F2 299 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 TMBIM4Q9HC24 238 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 TCF7L2Q9NQB0 619 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 SPEF1Q9Y4P9 236 aa12.75□□□□□ -0.37
RPS28-201ENST00000417088 ZNF726A6NNF4 738 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
RPS28-201ENST00000417088 TCF21O43680 179 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 HPXP02790 462 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 C8BP07358 591 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 GPX2P18283 190 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 TCN1P20061 433 aaPredicted RBP12.74□□□□□ -0.37
RPS28-201ENST00000417088 SLC6A2P23975 617 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 AQP1P29972 269 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 ALDH3B1P43353 468 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 GIPRP48546 466 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
RPS28-201ENST00000417088 IDH3AP50213 366 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 SEC24CP53992 1094 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 DVL1P1P54792 670 aaPredicted RBP12.74□□□□□ -0.37
RPS28-201ENST00000417088 RAB1AP62820 205 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 CCNIQ14094 377 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 FXNQ16595 210 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 PXKQ7Z7A4 578 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 CARM1Q86X55 608 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 C10orf53Q8N6V4 93 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 C7orf26Q96N11 449 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 ZNF607Q96SK3 696 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 MS4A5Q9H3V2 200 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 DENND2DQ9H6A0 471 aaPredicted RBP12.74□□□□□ -0.37
RPS28-201ENST00000417088 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
RPS28-201ENST00000417088 SERPINB7O75635 380 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 SERPINI2O75830 405 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 MFN2O95140 757 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 TGDSO95455 350 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 RAB36O95755 333 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 AHCYP23526 432 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 COL8A2P25067 703 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 RAB39AQ14964 217 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 MAD2L1BPQ15013 274 aaPredicted RBP12.73□□□□□ -0.37
RPS28-201ENST00000417088 SWT1Q5T5J6 900 aaKnown RBP12.73□□□□□ -0.37
RPS28-201ENST00000417088 LINC00114Q6XXX2 140 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 WDR88Q6ZMY6 472 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 RANBP3LQ86VV4 465 aaPredicted RBP12.73□□□□□ -0.37
RPS28-201ENST00000417088 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 ARMC8Q8IUR7 673 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 HIPK4Q8NE63 616 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 BHLHE22Q8NFJ8 381 aaPredicted RBP12.73□□□□□ -0.37
RPS28-201ENST00000417088 FGFBP3Q8TAT2 258 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 EBF4Q9BQW3 602 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 EVA1AQ9H8M9 152 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 MYEF2Q9P2K5 600 aaKnown RBP12.73□□□□□ -0.37
RPS28-201ENST00000417088 SLC13A4Q9UKG4 626 aa12.73□□□□□ -0.37
RPS28-201ENST00000417088 EVPLLA8MZ36 301 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 B4DSR2 109 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 UBL3O95164 117 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 MT-ATP6P00846 226 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 PATE4P0C8F1 98 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 ADORA3P0DMS8 318 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 ITGA2P17301 1181 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 GPR6P46095 362 aaPredicted RBP12.72□□□□□ -0.37
RPS28-201ENST00000417088 CSNK1A1P48729 337 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 BIDP55957 195 aa12.72□□□□□ -0.37
RPS28-201ENST00000417088 RPS23P62266 143 aaKnown RBP12.72□□□□□ -0.37
RPS28-201ENST00000417088 GKAP1Q5VSY0 366 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms