RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 PRF1P14222 555 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 PLA2G2AP14555 144 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 HOXB6P17509 224 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 CPN2P22792 545 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 CD79BP40259 229 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 RPS5P46782 204 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 VEGFCP49767 419 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 FOXA1P55317 472 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SLC26A5P58743 744 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 DEFA1P59665 94 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 DEFA3P59666 94 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 HMGCS1Q01581 520 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 TNFRSF17Q02223 184 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ID2Q02363 134 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 STX4Q12846 297 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SLAMF1Q13291 335 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 PON3Q15166 354 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SSX2Q16385 188 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 EXT1Q16394 746 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 TMEM44Q2T9K0 475 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 BTBD16Q32M84 506 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 HSD17B12Q53GQ0 312 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 KRTCAP3Q53RY4 240 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ATAD3CQ5T2N8 411 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 LIPMQ5VYY2 423 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 JMJD6Q6NYC1 403 aaPredicted RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 TMEM81Q6P7N7 255 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 BHLHB9Q6PI77 547 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ISLR2Q6UXK2 745 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ZCCHC23Q6ZST2 131 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 PAGE2Q7Z2X7 111 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 COMMD6Q7Z4G1 85 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 NOXA1Q86UR1 476 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SLC22A16Q86VW1 577 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 CARM1Q86X55 608 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 NUDT13Q86X67 352 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 NUDCD3Q8IVD9 361 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 TIGD4Q8IY51 512 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SLC43A2Q8N370 569 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 METTL4Q8N3J2 472 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ZCCHC7Q8N3Z6 543 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 RBMXL3Q8N7X1 1067 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 OR52L2PQ8NGH6 319 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 OR56B2PQ8NGI1 322 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 M1APQ8TC57 530 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 FAM216AQ8WUB2 273 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 PSMF1Q92530 271 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SNAPC3Q92966 411 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 DUS3LQ96G46 650 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 MRPL48Q96GC5 212 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ZNF597Q96LX8 424 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 NSMCE2Q96MF7 247 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 KCNA7Q96RP8 456 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 MECRQ9BV79 373 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 GATA5Q9BWX5 397 aaPredicted RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ACPTQ9BZG2 426 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 GORASP2Q9H8Y8 452 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 LIN28AQ9H9Z2 209 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 BRF2Q9HAW0 419 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SPACA1Q9HBV2 294 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ZBTB20Q9HC78 741 aaPredicted RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 MID1IP1Q9NPA3 183 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ADAP2Q9NPF8 381 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 PRTFDC1Q9NRG1 225 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 GSN-AS1Q9NRJ2 163 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 PNO1Q9NRX1 252 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ARL8BQ9NVJ2 186 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 MED9Q9NWA0 146 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 LYARQ9NX58 379 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 C5AR2Q9P296 337 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ABCD2Q9UBJ2 740 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 NDRG3Q9UGV2 375 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 PHF11Q9UIL8 331 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 BTNL2Q9UIR0 455 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ZNF229Q9UJW7 825 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ANAPC2Q9UJX6 822 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 FBXW2Q9UKT8 454 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 LIPT1Q9Y234 373 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ATG4BQ9Y4P1 393 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 CSAG2Q9Y5P2 127 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 COPG1Q9Y678 874 aaKnown RBP4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 SPACA6W5XKT8 324 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ARID1AO14497 2285 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 ACANP16112 2415 aa4.4□□□□□ -1.71
ATG4AP1-201ENST00000416893 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 TRBV11-1A0A0K0K1C0 115 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 A0A0X1KG70 313 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 A0A1W2PPW3 197 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 SYNDIG1LA6NDD5 238 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 GLOD5A6NK44 160 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 SAC3D1A6NKF1 404 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 WASHC1A8K0Z3 465 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 SLC31A2O15432 143 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 NUPL2O15504 423 aaKnown RBP4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 DNPH1O43598 174 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 HCRTR2O43614 444 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 CTNSO60931 367 aa4.39□□□□□ -1.71
ATG4AP1-201ENST00000416893 NDUFS6O75380 124 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms