RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 OR6K6Q8NGW6 343 aa13.46□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR6N1Q8NGY5 312 aa13.46□□□□□ -0.26
NCKIPSD-204ENST00000416649 GLYATL1Q969I3 302 aa13.46□□□□□ -0.26
NCKIPSD-204ENST00000416649 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR2AG1Q9H205 316 aa13.46□□□□□ -0.26
NCKIPSD-204ENST00000416649 KCNK15Q9H427 330 aa13.46□□□□□ -0.26
NCKIPSD-204ENST00000416649 SLC25A13Q9UJS0 675 aa13.46□□□□□ -0.26
NCKIPSD-204ENST00000416649 M0QYG6 137 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 LATO43561 262 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 APEHP13798 732 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF44P15621 663 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 PRLHRP49683 370 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 MECP2P51608 486 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 GFOD2Q3B7J2 385 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 AMZ1Q400G9 498 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 KRBOX4Q5JUW0 171 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 MISPQ8IVT2 679 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 CDK20Q8IZL9 346 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR1J2Q8NGS2 313 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 HSPA12BQ96MM6 686 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 CLCC1Q96S66 551 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 NAA11Q9BSU3 229 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 TMEM82A0PJX8 343 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 TRAPPC13A5PLN9 417 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 RNF222A6NCQ9 220 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 METTL21EPA6NDL7 271 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 COLCA2A8K830 154 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 FAM171A2A8MVW0 826 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 H7C417 338 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 OGG1O15527 345 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 LEFTY1O75610 366 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 GLSO94925 669 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 RCBTB2O95199 551 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 FBXO45P0C2W1 286 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 AKAIN1P0CW23 69 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 SELLP14151 372 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 CASRP41180 1078 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 SGCAQ16586 387 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR2B11Q5JQS5 317 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 TMEM200AQ86VY9 491 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 NUP43Q8NFH3 380 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR5AR1Q8NGP9 310 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 TMEM239Q8WW34 195 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 MIB2Q96AX9 1013 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 AIF1LQ9BQI0 150 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 MTFP1Q9UDX5 166 aa13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 FARSAQ9Y285 508 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-204ENST00000416649 A0A0B4J2A0 478 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 K7ESM1 405 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 RPN2P04844 631 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CPT2P23786 658 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CD34P28906 385 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 MNDAP41218 407 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 FRKP42685 505 aaPredicted RBP13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 GPM6BQ13491 265 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 Q3ZCU0 254 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 RPL22L1Q6P5R6 122 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 ACOT7LQ6ZUV0 252 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 ADIPOR2Q86V24 386 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 SKA3Q8IX90 412 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 KLHDC8AQ8IYD2 350 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR4A4PQ8NGN8 299 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 ADAMTS15Q8TE58 950 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 SHPKQ9UHJ6 478 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CARHSP1Q9Y2V2 147 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CPED1A4D0V7 1026 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 EEF1E1-BLOC1S5C9J1V9 151 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 RAD1O60671 282 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZIC2O95409 532 aaPredicted RBP13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 PAPLNO95428 1278 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CSF1P09603 554 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 CD96P40200 585 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 ELAVL1Q15717 326 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR9A2Q8NGT5 310 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 BPIFA2Q96DR5 249 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 MICU1Q9BPX6 476 aa13.44□□□□□ -0.26
NCKIPSD-204ENST00000416649 NPIPA5A0A0B4J1W7 369 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 GGT3PA6NGU5 568 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 NPIPA7E9PJI5 369 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 POP4O95707 220 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 NPIPA8P0DM63 369 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 PRF1P14222 555 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 PRKXP51817 358 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 POLR2LP62875 67 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 DEFA6Q01524 100 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 AIMP2Q13155 320 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CLINT1Q14677 625 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 NKAPLQ5M9Q1 402 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 STEAP1BQ6NZ63 245 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 ENPP7Q6UWV6 458 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 SLC29A4Q7RTT9 530 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 FAM129CQ86XR2 697 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 SLC35F2Q8IXU6 374 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CCDC107Q8WV48 283 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms