RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 KRCC1Q9NPI7 259 aaPredicted RBP15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 INIPQ9NRY2 104 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 HIF3AQ9Y2N7 669 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 CELSR1Q9NYQ6 3014 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 NPIPB13A6NJU9 1138 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 NPIPB4C9JG80 1138 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 MCIDASD6RGH6 385 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 M0R3G1 203 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 DIRAS1O95057 198 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 WNT11O96014 354 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 F13BP05160 661 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 CD3EP07766 207 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 MAKP20794 623 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 PAX7P23759 505 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 AQP2P41181 271 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 CSNK1A1P48729 337 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 RPS4XP62701 263 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 LSM11P83369 360 aaKnown RBP eCLIP15.79■□□□□ 0.127e-9■□□□□ 8.8
SEMA3B-201ENST00000416295 IQCCQ4KMZ1 466 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 PODNL1Q6PEZ8 512 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 TBPL2Q6SJ96 375 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 SPNS3Q6ZMD2 512 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 ZNF704Q6ZNC4 412 aaPredicted RBP15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 TMPRSS11FQ6ZWK6 438 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 OAFQ86UD1 273 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 MAGEE2Q8TD90 523 aaPredicted RBP15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 ZNF566Q969W8 418 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC25A44Q96H78 314 aaPredicted RBP15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 TMEM204Q9BSN7 226 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 ULBP2Q9BZM5 246 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 TRIM15Q9C019 465 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 STX18Q9P2W9 335 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 RNF115Q9Y4L5 304 aa15.79■□□□□ 0.12
SEMA3B-201ENST00000416295 CLOCKO15516 846 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 GADD45GO95257 159 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 RAF1P04049 648 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 HOXB1P14653 301 aaPredicted RBP15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 DNASE1P24855 282 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 UBE2NP61088 152 aaKnown RBP15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 SPIBQ01892 262 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 BSPH1Q075Z2 132 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 MELKQ14680 651 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 TESK1Q15569 626 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 CEACAM16Q2WEN9 425 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 TBRG1Q3YBR2 411 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 HIKESHIQ53FT3 197 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 ALG10Q5BKT4 473 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 TMEM108Q6UXF1 575 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 ZDHHC21Q8IVQ6 265 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 WDR31Q8NA23 367 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 MOSPD2Q8NHP6 518 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 CLPTM1LQ96KA5 538 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 LRGUKQ96M69 825 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 BTBD10Q9BSF8 475 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 NDEL1Q9GZM8 345 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 LIME1Q9H400 295 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 MAGIXQ9H6Y5 334 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 UBTD1Q9HAC8 227 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 MOV10Q9HCE1 1003 aaKnown RBP15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 NPAP1Q9NZP6 1156 aa15.78■□□□□ 0.12
SEMA3B-201ENST00000416295 ARPC4-TTLL3A0A0A6YYG9 625 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 TRBV4-1A0A0J9YWV2 114 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 A0A1W2PR80 420 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 TCRBV5S2A0A599 114 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 ZNF99A8MXY4 864 aaPredicted RBP15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 CENPBD1B2RD01 187 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 IGHG1P01857 330 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 PTAFRP25105 342 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 GPR4P46093 362 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 ZNF83P51522 516 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 ARF1P84077 181 aaKnown RBP15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 MS4A2Q01362 244 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 TRAP1Q12931 704 aaKnown RBP15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 BNIP1Q12981 228 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 KEAP1Q14145 624 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 LAPTM4AQ15012 233 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 TAF11Q15544 211 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 PHYHD1Q5SRE7 291 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 C20orf204Q6ZNR8 217 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 PIWIL3Q7Z3Z3 882 aaKnown RBP15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 OR4K5Q8NGD3 323 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 OR13C2Q8NGS9 318 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 ASB10Q8WXI3 467 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 BCL2L2Q92843 193 aaPredicted RBP15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 TMEM54Q969K7 222 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC7A6OSQ96CW6 309 aaPredicted RBP15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 SEPHS2Q99611 448 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 MGAT4BQ9UQ53 548 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 PLEKHA6Q9Y2H5 1048 aa15.77■□□□□ 0.12
SEMA3B-201ENST00000416295 HIVEP1P15822 2718 aa15.77■□□□□ 0.11
SEMA3B-201ENST00000416295 AKAP9Q99996 3911 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 TRAV27A0A087WT01 109 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 DPRXA6NFQ7 191 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 PGA4P0DJD7 388 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 PGA3P0DJD8 388 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 RASSF2P50749 326 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 CLRN1P58418 232 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 ACKR1Q16570 336 aa15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 FAM98BQ52LJ0 330 aaKnown RBP15.76■□□□□ 0.11
SEMA3B-201ENST00000416295 MEX3DQ86XN8 651 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms