RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 MNTQ99583 582 aa13.43□□□□□ -0.26
USP4-203ENST00000415188 MMP28Q9H239 520 aa13.43□□□□□ -0.26
USP4-203ENST00000415188 B3GAT2Q9NPZ5 323 aa13.43□□□□□ -0.26
USP4-203ENST00000415188 POU2F3Q9UKI9 436 aa13.43□□□□□ -0.26
USP4-203ENST00000415188 RASD1Q9Y272 281 aa13.43□□□□□ -0.26
USP4-203ENST00000415188 TMEM184BQ9Y519 407 aaPredicted RBP13.43□□□□□ -0.26
USP4-203ENST00000415188 FAM240BA0A1B0GVZ2 78 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 A0A1W2PQD3 144 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 H3BMH7 237 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 GNB5O14775 395 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 RGS13O14921 159 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TO15178 435 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 NKX2-8O15522 239 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 SLC43A1O75387 559 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 IGKV3-11P04433 115 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 UCHL1P09936 223 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 FAM157BP0CG42 384 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ZNF28P17035 718 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 CLDN20P56880 219 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 BCL2A1Q16548 175 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ZFP69Q49AA0 526 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TP53I3Q53FA7 332 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 UNQ9370/PRO34162Q6UXP9 181 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 SSX6Q7RTT6 188 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 JAZF1Q86VZ6 243 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 KMT5CQ86Y97 462 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 METTL27Q8N6F8 245 aaPredicted RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 LRRC75AQ8NAA5 344 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 THAP4Q8WY91 577 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ZPBPQ9BS86 351 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ZNF768Q9H5H4 540 aaKnown RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 PNO1Q9NRX1 252 aaKnown RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 MALT1Q9UDY8 824 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 IL17BQ9UHF5 180 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TEKT2Q9UIF3 430 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TENM4Q6N022 2769 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ZNF891A8MT65 544 aaPredicted RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 ZNF879B4DU55 563 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 DVL2O14641 736 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TFECO14948 347 aaPredicted RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 ORC5O43913 435 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 EIF4E2O60573 245 aaKnown RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 UQCRC1P31930 480 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ACVR1BP36896 505 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 PITPNBP48739 271 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ARL4DP49703 201 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 BTG1P62324 171 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ERVK-25P63136 954 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 PITPNAQ00169 270 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 CD226Q15762 336 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TBRG1Q3YBR2 411 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 GPR139Q6DWJ6 353 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 LRRC17Q8N6Y2 441 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 SAMD12Q8N8I0 201 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TRMT10AQ8TBZ6 339 aaKnown RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 ZNF721Q8TF20 911 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ADIPOR1Q96A54 375 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 RFT1Q96AA3 541 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 OR6C1Q96RD1 312 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 NXF5Q9H1B4 397 aaKnown RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 PPIL3Q9H2H8 161 aaKnown RBP13.42□□□□□ -0.26
USP4-203ENST00000415188 FKRPQ9H9S5 495 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 NANSQ9NR45 359 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 ADAM18Q9Y3Q7 739 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
USP4-203ENST00000415188 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
USP4-203ENST00000415188 SPTA1P02549 2419 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 ARPC4-TTLL3A0A0A6YYG9 625 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 TCRBV16S1A1N1A0A5B0 115 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 FAM172BPA6NC97 362 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 OR6C76A6NM76 312 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 HSPB2A8KAH6 182 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 CENPXA8MT69 81 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 PDCD5O14737 125 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 DDAH2O95865 285 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 EIF4EP06730 217 aaKnown RBP13.41□□□□□ -0.26
USP4-203ENST00000415188 TACSTD2P09758 323 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 ASAH2BP0C7U1 165 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 SPTBP11277 2137 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 FBLP22087 321 aaKnown RBP13.41□□□□□ -0.26
USP4-203ENST00000415188 EDNRAP25101 427 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 SDHAP31040 664 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 HSPB2Q16082 182 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 TIGD3Q6B0B8 471 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 TTLL10Q6ZVT0 673 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 SLC16A9Q7RTY1 509 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 FAM122BQ7Z309 247 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 PRSS42Q7Z5A4 293 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 D2HGDHQ8N465 521 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 OR4M1Q8NGD0 313 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 DAZLQ92904 295 aaKnown RBP13.41□□□□□ -0.26
USP4-203ENST00000415188 CREB3L1Q96BA8 519 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 NMNAT3Q96T66 252 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 MARVELD1Q9BSK0 173 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 WACQ9BTA9 647 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 MRI1Q9BV20 369 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 ULBP3Q9BZM4 244 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 FAM117AQ9C073 453 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 ADAM19Q9H013 955 aa13.41□□□□□ -0.26
USP4-203ENST00000415188 MMP25Q9NPA2 562 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms