RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 GABARAPL3Q9BY60 117 aa2.37□□□□□ -2.03
ATG4C-204ENST00000414558 RWDD1Q9H446 243 aaPredicted RBP2.37□□□□□ -2.03
ATG4C-204ENST00000414558 LY9Q9HBG7 655 aa2.37□□□□□ -2.03
ATG4C-204ENST00000414558 WFDC1Q9HC57 220 aa2.37□□□□□ -2.03
ATG4C-204ENST00000414558 PACSIN2Q9UNF0 486 aaPredicted RBP2.37□□□□□ -2.03
ATG4C-204ENST00000414558 TMEM223A0PJW6 202 aa2.36□□□□□ -2.03
ATG4C-204ENST00000414558 GAPDHP04406 335 aaKnown RBP2.36□□□□□ -2.03
ATG4C-204ENST00000414558 HMGB2P26583 209 aaKnown RBP2.36□□□□□ -2.03
ATG4C-204ENST00000414558 QARSP47897 775 aaKnown RBP2.36□□□□□ -2.03
ATG4C-204ENST00000414558 OR5I1Q13606 314 aa2.36□□□□□ -2.03
ATG4C-204ENST00000414558 SELPLGQ14242 412 aa2.36□□□□□ -2.03
ATG4C-204ENST00000414558 GANABQ14697 944 aaKnown RBP2.36□□□□□ -2.03
ATG4C-204ENST00000414558 IGFBP7Q16270 282 aa2.36□□□□□ -2.03
ATG4C-204ENST00000414558 DPYSL2Q16555 572 aa2.36□□□□□ -2.03
ATG4C-204ENST00000414558 LINC00173Q6ZV60 143 aa2.36□□□□□ -2.03
ATG4C-204ENST00000414558 YEATS2Q9ULM3 1422 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 CIB4A0PJX0 185 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 POLR2DO15514 142 aaKnown RBP2.35□□□□□ -2.03
ATG4C-204ENST00000414558 MED7O43513 233 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 UPK3AO75631 287 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 HSMCR30P0CW71 290 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 CA8P35219 290 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 RPL13AP40429 203 aaKnown RBP2.35□□□□□ -2.03
ATG4C-204ENST00000414558 CRYBB1P53674 252 aaPredicted RBP2.35□□□□□ -2.03
ATG4C-204ENST00000414558 CNIH2Q6PI25 160 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 CNSTQ6PJW8 725 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 GATSQ8NAP1 163 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 OR52H1Q8NGJ2 320 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 UBE2E3Q969T4 207 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 TGM7Q96PF1 710 aa2.35□□□□□ -2.03
ATG4C-204ENST00000414558 RSPH9Q9H1X1 276 aaPredicted RBP2.35□□□□□ -2.03
ATG4C-204ENST00000414558 WDR62O43379 1518 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 COL5A1P20908 1838 aaPredicted RBP2.34□□□□□ -2.03
ATG4C-204ENST00000414558 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 RAD51BO15315 384 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 FOLR1P15328 257 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 TCN1P20061 433 aaPredicted RBP2.34□□□□□ -2.03
ATG4C-204ENST00000414558 GNA11P29992 359 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 SOX6P35712 828 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 CX3CR1P49238 355 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 CCR8P51685 355 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 SUB1P53999 127 aaKnown RBP eCLIP2.34□□□□□ -2.03
ATG4C-204ENST00000414558 ZNF816Q0VGE8 651 aaPredicted RBP2.34□□□□□ -2.03
ATG4C-204ENST00000414558 C10orf120Q5SQS8 335 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 NTM-AS1Q6ZSK4 140 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 LGI3Q8N145 548 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 STPG2Q8N412 459 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 CCDC110Q8TBZ0 833 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 SDR42E1Q8WUS8 393 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 L3HYPDHQ96EM0 354 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 DOK1Q99704 481 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 UGT1A7Q9HAW7 530 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 UGT1A10Q9HAW8 530 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 UGT1A8Q9HAW9 530 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 C12orf10Q9HB07 376 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 ACTR3BQ9P1U1 418 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 KIF3AQ9Y496 699 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 TIMM10BQ9Y5J6 103 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 S4R3C0 116 aa2.34□□□□□ -2.03
ATG4C-204ENST00000414558 CEMIPQ8WUJ3 1361 aa2.34□□□□□ -2.04
ATG4C-204ENST00000414558 PTPRTO14522 1441 aa2.34□□□□□ -2.04
ATG4C-204ENST00000414558 BRWD3Q6RI45 1802 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 IGHV3-74A0A0B4J1X5 117 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 A0A1B0GVI7 797 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 OR5B21A6NL26 309 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 A8MUU9 505 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 HSD17B6O14756 317 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 KMOO15229 486 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 DIRAS1O95057 198 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 IL4P05112 153 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 GPR6P46095 362 aaPredicted RBP2.33□□□□□ -2.04
ATG4C-204ENST00000414558 RPS21P63220 83 aaKnown RBP2.33□□□□□ -2.04
ATG4C-204ENST00000414558 IL1RL1Q01638 556 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 LOXL1Q08397 574 aaPredicted RBP2.33□□□□□ -2.04
ATG4C-204ENST00000414558 KLRB1Q12918 225 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 PLD1Q13393 1074 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 PRPSAP1Q14558 356 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 GINS1Q14691 196 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 IRF4Q15306 451 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 PIANPQ8IYJ0 282 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 FAM9BQ8IZU0 186 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 FAM133AQ8N9E0 248 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 PYROXD1Q8WU10 500 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 RNF139Q8WU17 664 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 SGK3Q96BR1 496 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 CXorf40BQ96DE9 158 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 RBMXL1Q96E39 390 aaKnown RBP2.33□□□□□ -2.04
ATG4C-204ENST00000414558 SECISBP2Q96T21 854 aaKnown RBP2.33□□□□□ -2.04
ATG4C-204ENST00000414558 OSBPL10Q9BXB5 764 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 LRRN3Q9H3W5 708 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 GPATCH2LQ9NWQ4 482 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 LAMP5Q9UJQ1 280 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 POLDIP2Q9Y2S7 368 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 MEMO1Q9Y316 297 aa2.33□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF850A8MQ14 1090 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 SGK1O00141 431 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 CDRT1O95170 752 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 DIRAS3O95661 229 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 LAP3P28838 519 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 RORAP35398 523 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms