RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RNF13O43567 381 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 HOXB1P14653 301 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-207ENST00000413642 CALCRP30988 508 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 GSK3BP49841 420 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 NUDT2P50583 147 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 LSM11P83369 360 aaKnown RBP eCLIP22.89■■□□□ 1.252e-28■□□□□ 11.1
VEGFA-207ENST00000413642 ZNF544Q6NX49 715 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 LRR1Q96L50 414 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 HOPXQ9BPY8 73 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-207ENST00000413642 ULBP2Q9BZM5 246 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 VPS13CQ709C8 3753 aa22.89■■□□□ 1.25
VEGFA-207ENST00000413642 SETD2Q9BYW2 2564 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-207ENST00000413642 CXCR6O00574 342 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 PIP5K1CO60331 668 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 IGLV1-44P01699 117 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 MT-ND1P03886 318 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 HIST1H2ABP04908 130 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 CBR1P16152 277 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 HOXB4P17483 251 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-207ENST00000413642 FUT1P19526 365 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 CAPZA2P47755 286 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 IDH3GP51553 393 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-207ENST00000413642 NAAAQ02083 359 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 HIST3H2AQ7L7L0 130 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 NANOGNBQ7Z5D8 188 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 MDP1Q86V88 176 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 MAPK1IP1LQ8NDC0 245 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 TMEM239Q8WW34 195 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 HIST1H2ACQ93077 130 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 HS6ST2Q96MM7 605 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 NOX3Q9HBY0 568 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 A4GNTQ9UNA3 340 aa22.88■■□□□ 1.25
VEGFA-207ENST00000413642 BLOC1S5-TXNDC5H3BN57 136 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 OR7A10O76100 309 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 HLA-HP01893 362 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 APOBEC3AP31941 199 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-207ENST00000413642 LSP1P33241 339 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 RBM34P42696 430 aaKnown RBP22.87■■□□□ 1.25
VEGFA-207ENST00000413642 CSNK1A1P48729 337 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 TMEM54Q969K7 222 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 SGTBQ96EQ0 304 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 POM121Q96HA1 1249 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 KATNB1Q9BVA0 655 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 POLR2J2Q9GZM3 115 aaKnown RBP22.87■■□□□ 1.25
VEGFA-207ENST00000413642 POLR2J3Q9H1A7 115 aaKnown RBP22.87■■□□□ 1.25
VEGFA-207ENST00000413642 B3GAT2Q9NPZ5 323 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 RHCGQ9UBD6 479 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 POFUT2Q9Y2G5 429 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 AP3M1Q9Y2T2 418 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 C2CD3Q4AC94 2353 aa22.87■■□□□ 1.25
VEGFA-207ENST00000413642 RNF223E7ERA6 249 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 J3KTA2 159 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 GSTA4O15217 222 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 SSX4O60224 188 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 SNX3O60493 162 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 ZNF682O95780 498 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 IGKV3-15P01624 115 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 CRYAAP02489 173 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 F13BP05160 661 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 B4GALT1P15291 398 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 NCK1P16333 377 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 RPL18Q07020 188 aaKnown RBP22.86■■□□□ 1.25
VEGFA-207ENST00000413642 NPRL3Q12980 569 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 MST1LQ2TV78 715 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 HACD2Q6Y1H2 254 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 ZNF813Q6ZN06 617 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 OR6X1Q8NH79 312 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 MOSPD2Q8NHP6 518 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 FBXO17Q96EF6 278 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 KCNS3Q9BQ31 491 aa22.86■■□□□ 1.25
VEGFA-207ENST00000413642 HEXAP06865 529 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 AQP2P41181 271 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 PSME3P61289 254 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 HGFACQ04756 655 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 RUNX1T1Q06455 604 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 PIGFQ07326 219 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 VHLLQ6RSH7 139 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 DNM1P46Q6ZS02 220 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 MEX3DQ86XN8 651 aaKnown RBP22.85■■□□□ 1.25
VEGFA-207ENST00000413642 FAM169BQ8N8A8 192 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 PRRC1Q96M27 445 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 ADAD1Q96M93 576 aaKnown RBP22.85■■□□□ 1.25
VEGFA-207ENST00000413642 B3GNT2Q9NY97 397 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 GLTPQ9NZD2 209 aa22.85■■□□□ 1.25
VEGFA-207ENST00000413642 NF1P21359 2839 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 GMNCA6NCL1 334 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 CD79AP11912 226 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 ETFDHQ16134 617 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 C3orf36Q3SXR2 165 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 LRFN4Q6PJG9 635 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 CPLX4Q7Z7G2 160 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 RBM15BQ8NDT2 890 aaKnown RBP22.84■■□□□ 1.25
VEGFA-207ENST00000413642 LZICQ8WZA0 190 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 FOXB1Q99853 325 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 ZNF224Q9NZL3 707 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 MED31Q9Y3C7 131 aa22.84■■□□□ 1.25
VEGFA-207ENST00000413642 FFAR1O14842 300 aa22.83■■□□□ 1.25
VEGFA-207ENST00000413642 BCL10O95999 233 aa22.83■■□□□ 1.25
VEGFA-207ENST00000413642 SERPINA1P01009 418 aa22.83■■□□□ 1.25
VEGFA-207ENST00000413642 THRBP10828 461 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms