RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 OR6N1Q8NGY5 312 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 MAGEE2Q8TD90 523 aaPredicted RBP12.93□□□□□ -0.34
LIMS4-201ENST00000413601 GEMIN6Q8WXD5 167 aaKnown RBP12.93□□□□□ -0.34
LIMS4-201ENST00000413601 SGTBQ96EQ0 304 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 HSH2DQ96JZ2 352 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 B3GAT2Q9NPZ5 323 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 MED31Q9Y3C7 131 aa12.93□□□□□ -0.34
LIMS4-201ENST00000413601 IGHV1-18A0A0C4DH31 117 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 OVOL3O00110 214 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 TMCC2O75069 709 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 DCTN3O75935 186 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 CD8AP01732 235 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 IFNA8P32881 189 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 CDKN1AP38936 164 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 ATP5J2P56134 94 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
LIMS4-201ENST00000413601 RPL18Q07020 188 aaKnown RBP12.92□□□□□ -0.34
LIMS4-201ENST00000413601 MELKQ14680 651 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 GLYATQ6IB77 296 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 PRSS57Q6UWY2 283 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 FAM156AQ8NDB6 213 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 RBM15BQ8NDT2 890 aaKnown RBP12.92□□□□□ -0.34
LIMS4-201ENST00000413601 GTPBP3Q969Y2 492 aaKnown RBP12.92□□□□□ -0.34
LIMS4-201ENST00000413601 ADAD1Q96M93 576 aaKnown RBP12.92□□□□□ -0.34
LIMS4-201ENST00000413601 Q96MF0 132 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 CCT8L2Q96SF2 557 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 TRAF4Q9BUZ4 470 aaPredicted RBP12.92□□□□□ -0.34
LIMS4-201ENST00000413601 FNDC11Q9BVV2 318 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 DLL4Q9NR61 685 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 FAIMQ9NVQ4 179 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 TAGLN3Q9UI15 199 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 MOKQ9UQ07 419 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 ATP23Q9Y6H3 246 aa12.92□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF503-AS2A6NEH8 195 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 ATP6V1G2-DDX39BF2Z307 99 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 FFAR1O14842 300 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 IGF2P01344 180 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 F13BP05160 661 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
LIMS4-201ENST00000413601 TCN1P20061 433 aaPredicted RBP12.91□□□□□ -0.34
LIMS4-201ENST00000413601 AQP2P41181 271 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 CSNK1A1P48729 337 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 DTX2Q86UW9 622 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 OFCC1Q8IZS5 231 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 OR6X1Q8NH79 312 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 MOSPD2Q8NHP6 518 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 TMEM54Q969K7 222 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 DHRS9Q9BPW9 319 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 ULBP2Q9BZM5 246 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 MAN2C1Q9NTJ4 1040 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 CRNNQ9UBG3 495 aaPredicted RBP12.91□□□□□ -0.34
LIMS4-201ENST00000413601 POFUT2Q9Y2G5 429 aa12.91□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF469Q96JG9 3925 aaPredicted RBP12.91□□□□□ -0.34
LIMS4-201ENST00000413601 BCL10O95999 233 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 CELA3BP08861 270 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 CECR9P0C854 216 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 IFI30P13284 250 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 PAX7P23759 505 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 TTKP33981 857 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 CAPZA2P47755 286 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 FABP6P51161 128 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 LAPTM4AQ15012 233 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 TRAM2Q15035 370 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 AGAP6Q5VW22 663 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF813Q6ZN06 617 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 TSEN54Q7Z6J9 526 aaKnown RBP12.9□□□□□ -0.34
LIMS4-201ENST00000413601 MEX3DQ86XN8 651 aaKnown RBP12.9□□□□□ -0.34
LIMS4-201ENST00000413601 NRMQ8IXM6 262 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 PGAM4Q8N0Y7 254 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 ANKS4BQ8N8V4 417 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 LIPHQ8WWY8 451 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 ZNF566Q969W8 418 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 BPIFA2Q96DR5 249 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 TRMT61AQ96FX7 289 aaKnown RBP12.9□□□□□ -0.34
LIMS4-201ENST00000413601 SLC25A44Q96H78 314 aaPredicted RBP12.9□□□□□ -0.34
LIMS4-201ENST00000413601 SEC61A2Q9H9S3 476 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 RPS6KA6Q9UK32 745 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 ACANP16112 2415 aa12.9□□□□□ -0.34
LIMS4-201ENST00000413601 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.35
LIMS4-201ENST00000413601 A0A1W2PRG6 482 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 GMNNO75496 209 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 PRSS23O95084 383 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 IGKV3-15P01624 115 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 IGLV1-44P01699 117 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 TSPAN19P0C672 248 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 B4GALT1P15291 398 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 FOSL1P15407 271 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 CBR1P16152 277 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 MAKP20794 623 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 MSX2P35548 267 aaPredicted RBP12.89□□□□□ -0.35
LIMS4-201ENST00000413601 IDH3GP51553 393 aaPredicted RBP12.89□□□□□ -0.35
LIMS4-201ENST00000413601 NAAAQ02083 359 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 LRFN4Q6PJG9 635 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 TBPL2Q6SJ96 375 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 MDP1Q86V88 176 aa12.89□□□□□ -0.35
LIMS4-201ENST00000413601 MYPOPQ86VE0 399 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms