RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 RFLNAQ6ZTI6 216 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 BIVMQ86UB2 503 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 LHFPL3Q86UP9 236 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 THOC6Q86W42 341 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 MFSD6LQ8IWD5 586 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 LIX1Q8N485 282 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 PNKDQ8N490 385 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 C11orf42Q8N5U0 333 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 ZNF557Q8N988 423 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR4A4PQ8NGN8 299 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 RHEBL1Q8TAI7 183 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 FGF14Q92915 247 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 TMEM246Q9BRR3 403 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 RIOK2Q9BVS4 552 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 FGF20Q9NP95 211 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 SAMSN1Q9NSI8 373 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 MTRF1LQ9UGC7 380 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 LSM7Q9UK45 103 aaKnown RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 PACSIN2Q9UNF0 486 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 SLC25A15Q9Y619 301 aa3.43□□□□□ -1.86
HMGB3P31-201ENST00000413333 C12orf71A8MTZ7 269 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 H0YIV9 168 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 HDAC3O15379 428 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 SRSF10O75494 262 aaKnown RBP3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 KLF8O95600 359 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 ALDOBP05062 364 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 UQCRFS1P47985 274 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 NPBWR2P48146 333 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 ACTA2P62736 377 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 ACTG2P63267 376 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 ACTC1P68032 377 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 ACTA1P68133 377 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 ECH1Q13011 328 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 NRF1Q16656 503 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 PPM1LQ5SGD2 360 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 LCN12Q6JVE5 192 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 TMEM53Q6P2H8 277 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 RNF165Q6ZSG1 346 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 Q6ZSR3 168 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 SLC16A14Q7RTX9 510 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 RALGPS2Q86X27 583 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR5B3Q8NH48 314 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 NEIL3Q8TAT5 605 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 SLC7A13Q8TCU3 470 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 CXorf40AQ8TE69 158 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 TSEN15Q8WW01 171 aaKnown RBP3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 PIBF1Q8WXW3 757 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 FCRL1Q96LA6 429 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 TGS1Q96RS0 853 aaKnown RBP3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 KCTD14Q9BQ13 255 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR51M1Q9H341 326 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 CRLF2Q9HC73 371 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 EXD2Q9NVH0 621 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 IL17CQ9P0M4 197 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 CDH10Q9Y6N8 788 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 PHLPP2Q6ZVD8 1323 aa3.42□□□□□ -1.86
HMGB3P31-201ENST00000413333 CNTNAP1P78357 1384 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 SUPT3HB4E1H0 165 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 H0YC42 278 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 CTAG2O75638 210 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 TNFSF13O75888 250 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 LY6G6DO95868 133 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 IGKV3-15P01624 115 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 ERCC1P07992 297 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 STAG3L3P0CL85 134 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 ICAM2P13598 275 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 OTX1P32242 354 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 TFPI2P48307 235 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 SUB1P53999 127 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 RAB10P61026 200 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 REEP3Q6NUK4 255 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 TMEM220Q6QAJ8 160 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 SSX9Q7RTT3 188 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 TMCO2Q7Z6W1 182 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 TMEM61Q8N0U2 210 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 FBXL16Q8N461 479 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 HSD17B11Q8NBQ5 300 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 FBXL13Q8NEE6 735 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 OR2L5Q8NG80 312 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 SDR42E1Q8WUS8 393 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 PEX13Q92968 403 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 PRRC1Q96M27 445 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 YTHDF1Q9BYJ9 559 aaKnown RBP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 IQCGQ9H095 443 aaKnown RBP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 RACGAP1Q9H0H5 632 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 CWH43Q9H720 699 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 AUNIPQ9H7T9 357 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 UGT1A10Q9HAW8 530 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 RPRD1BQ9NQG5 326 aaKnown RBP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 PDP1Q9P0J1 537 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 CLCF1Q9UBD9 225 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 PSME2Q9UL46 239 aa3.41□□□□□ -1.86
HMGB3P31-201ENST00000413333 PLEKHG1Q9ULL1 1385 aa3.4□□□□□ -1.86
HMGB3P31-201ENST00000413333 PSMB11A5LHX3 300 aa3.4□□□□□ -1.87
HMGB3P31-201ENST00000413333 USP27XA6NNY8 438 aa3.4□□□□□ -1.87
HMGB3P31-201ENST00000413333 ERVV-1B6SEH8 477 aa3.4□□□□□ -1.87
HMGB3P31-201ENST00000413333 CDC7O00311 574 aa3.4□□□□□ -1.87
HMGB3P31-201ENST00000413333 EMC8O43402 210 aa3.4□□□□□ -1.87
HMGB3P31-201ENST00000413333 EEDO75530 441 aaKnown RBP3.4□□□□□ -1.87
HMGB3P31-201ENST00000413333 EIF3GO75821 320 aaKnown RBP eCLIP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms