RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TMPPEQ6ZT21 453 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 GALNT16Q8N428 558 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 FGF11Q92914 225 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ZBTB8AQ96BR9 441 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 FAM173AQ9BQD7 235 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 HDHD5Q9BXW7 423 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 TGIF2Q9GZN2 237 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ACOT13Q9NPJ3 140 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 INPP5EQ9NRR6 644 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SIRT3Q9NTG7 399 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 B3GNT3Q9Y2A9 372 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CMAHPQ9Y471 501 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SLCO1B1Q9Y6L6 691 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 TCRBV5S2A0A599 114 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 CDHR4A6H8M9 788 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 IFNA17P01571 189 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 CRYABP02511 175 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 UQCRC1P31930 480 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 POU3F1Q03052 451 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 FZD5Q13467 585 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 IL10RAQ13651 578 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 APOFQ13790 326 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 FGFBP1Q14512 234 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SLC25A25Q6KCM7 469 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 CPOQ8IVL8 374 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 MSRB3Q8IXL7 192 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF433Q8N7K0 673 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF283Q8N7M2 679 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 OR5T2Q8NGG2 359 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 C11orf24Q96F05 449 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF681Q96N22 645 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 RBM24Q9BX46 236 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 FN3KQ9H479 309 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 RALYQ9UKM9 306 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 EMC9Q9Y3B6 208 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SLC43A1O75387 559 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 MRPL33O75394 65 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 RPP14O95059 124 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 IFNA2P01563 188 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SMIM10L1P0DMW3 83 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 PPP5CP53041 499 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ERVK-25P63136 954 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ATPAF1Q5TC12 328 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SLC6A19Q695T7 634 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ESPNLQ6ZVH7 1005 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 STOML3Q8TAV4 291 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SMIM10Q96HG1 83 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 PAPOLGQ9BWT3 736 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SIAEQ9HAT2 523 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 CES1P1Q9UKY3 287 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 RP2O75695 350 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 CDRT1O95170 752 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 MAP2K4P45985 399 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 MPEG1Q2M385 716 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 PLCXD3Q63HM9 321 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 KDM4DQ6B0I6 523 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 HBMQ6B0K9 141 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 CLIP4Q8N3C7 705 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF439Q8NDP4 499 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 WDR77Q9BQA1 342 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SPTA1P02549 2419 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ARRDC5A6NEK1 342 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ANXA2P2A6NMY6 339 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF850A8MQ14 1090 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ALG1L2C9J202 215 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ANXA2P07355 339 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 CD14P08571 375 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 RIDAP52758 137 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 EIF5AP63241 154 aaKnown RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 MXD1Q05195 221 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 IQCF1Q8N6M8 205 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 HTRA1Q92743 480 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 MUL1Q969V5 352 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 SPAG8Q99932 426 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-211ENST00000413186 ENKD1Q9H0I2 346 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 IL20RAQ9UHF4 553 aa7.79□□□□□ -1.16
SYNE1-211ENST00000413186 TRAV27A0A087WT01 109 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 ANKUB1A6NFN9 424 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 OR6C65A6NJZ3 312 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 TXNL1O43396 289 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 PLATP00750 562 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 SOX3P41225 446 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 NAA10P41227 235 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-211ENST00000413186 GPR85P60893 370 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 ZXDCQ2QGD7 858 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-211ENST00000413186 DPY19L2P2Q6ZN68 376 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 H1FNTQ75WM6 255 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-211ENST00000413186 AAED1Q7RTV5 226 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 C17orf82Q86X59 251 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-211ENST00000413186 OR13C2Q8NGS9 318 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 SLCO4A1Q96BD0 722 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 SAT2Q96F10 170 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-211ENST00000413186 UQCC2Q9BRT2 126 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 SEMA4CQ9C0C4 833 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 ACER3Q9NUN7 267 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 FAM166BA8MTA8 275 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 GASTP01350 101 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 CD79BP40259 229 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 OR1C1Q15619 314 aa7.78□□□□□ -1.16
SYNE1-211ENST00000413186 MRGPREQ86SM8 312 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms