RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 SCGB1C2P0DMR2 95 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 RPL17P18621 184 aaKnown RBP6.86□□□□□ -1.31
PTPN3-203ENST00000412145 CASP3P42574 277 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 HIST1H3AP68431 136 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 ERHP84090 104 aaKnown RBP6.86□□□□□ -1.31
PTPN3-203ENST00000412145 HYAL2Q12891 473 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 CST6Q15828 149 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 EML3Q32P44 896 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 MOGAT2Q3SYC2 334 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 GTDC1Q4AE62 458 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 TP53I3Q53FA7 332 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 KDM4DQ6B0I6 523 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 DTWD1Q8N5C7 304 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 OR10Z1Q8NGY1 313 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 OR2G3Q8NGZ4 309 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 NDRG1Q92597 394 aaKnown RBP6.86□□□□□ -1.31
PTPN3-203ENST00000412145 ZDHHC11Q9H8X9 412 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 A0A0U1RQJ8 604 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 TMEM129A0AVI4 362 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 LIMS3P0CW19 117 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 LIMS4P0CW20 117 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 TYRP1P17643 537 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 USF1P22415 310 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-203ENST00000412145 HTR5AP47898 357 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 NLGN4YQ8NFZ3 816 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF296Q8WUU4 475 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-203ENST00000412145 VAMP8Q9BV40 100 aa6.86□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF629Q9UEG4 869 aaPredicted RBP6.86□□□□□ -1.31
PTPN3-203ENST00000412145 A8MU76 341 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 FBXO24O75426 580 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 KLF8O95600 359 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 FPR3P25089 353 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 GRPRP30550 384 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 NDUFA6P56556 154 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 PPP1R3BQ86XI6 285 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 UBALD1Q8TB05 177 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 SLC39A7Q92504 469 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 ZMYND19Q96E35 227 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 NEIL1Q96FI4 390 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 SLC39A13Q96H72 371 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 MAP6Q96JE9 813 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 S1PR3Q99500 378 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 NIT2Q9NQR4 276 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 B3GALT5Q9Y2C3 310 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 MRPS28Q9Y2Q9 187 aaKnown RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 NINQ8N4C6 2090 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 IGKV6D-41A0A0C4DH26 115 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF814B7Z6K7 855 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 LAMP1P11279 417 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 TNFSF8P32971 234 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 OR1D4P47884 311 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 VASPP50552 380 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 CNN1P51911 297 aaKnown RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 MFAP5Q13361 173 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 LY6G5CQ5SRR4 150 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 TRAT1Q6PIZ9 186 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 EMG1Q92979 244 aaKnown RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 MED9Q9NWA0 146 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 GALR2O43603 387 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 CRISP2P16562 243 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 JUNBP17275 347 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 ZNF93P35789 620 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 ZP2Q05996 745 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 EXT1Q16394 746 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 MSS51Q4VC12 460 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 CRTC1Q6UUV9 634 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 PLXDC2Q6UX71 529 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 Q6ZVL8 140 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 UBE3DQ7Z6J8 389 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 F2RL3Q96RI0 385 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 IFT172Q9UG01 1749 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 IL1RNP18510 177 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 RPE65Q16518 533 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 NLRC3Q7RTR2 1065 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 PRICKLE2Q7Z3G6 844 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 TAAR6Q96RI8 345 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 TTTY10Q9BZA0 68 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 GABRQQ9UN88 632 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 MROH1Q8NDA8 1641 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 TIMM8AO60220 97 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 SLC16A7O60669 478 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 SORBS2O94875 1100 aaKnown RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 HOXB5P09067 269 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 YPEL5P62699 121 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 HTR4Q13639 388 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 LYPD4Q6UWN0 246 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 EDAQ92838 391 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 IGSF21Q96ID5 467 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 CPPED1Q9BRF8 314 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 HEMK1Q9Y5R4 338 aaPredicted RBP6.85□□□□□ -1.31
PTPN3-203ENST00000412145 SMIM30A4D0T7 59 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 FAM183AA6NL82 134 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 NME4O00746 187 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 MTX2O75431 263 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 ALX3O95076 343 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 SEMA4FO95754 770 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 TCRBP04435 133 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 UQCRFS1P47985 274 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 KCNJ3P48549 501 aa6.85□□□□□ -1.31
PTPN3-203ENST00000412145 HERVK_113P61574 105 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms