RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ZNF587Q96SQ5 575 aaPredicted RBP18.16■□□□□ 0.5
USP39-204ENST00000409766 MNTQ99583 582 aa18.16■□□□□ 0.5
USP39-204ENST00000409766 WDR76Q9H967 626 aa18.16■□□□□ 0.5
USP39-204ENST00000409766 WDR54Q9H977 334 aa18.16■□□□□ 0.5
USP39-204ENST00000409766 MRPL39Q9NYK5 338 aaKnown RBP18.16■□□□□ 0.5
USP39-204ENST00000409766 MED11Q9P086 117 aa18.16■□□□□ 0.5
USP39-204ENST00000409766 ZDBF2Q9HCK1 2354 aa18.16■□□□□ 0.5
USP39-204ENST00000409766 TRIM3O75382 744 aaPredicted RBP18.15■□□□□ 0.5
USP39-204ENST00000409766 ZFPL1O95159 310 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 IGHMP01871 453 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 ALOX5APP20292 161 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 ZFP36L1Q07352 338 aaKnown RBP18.15■□□□□ 0.5
USP39-204ENST00000409766 LIPNQ5VXI9 398 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 SLC23A3Q6PIS1 610 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 SYT9Q86SS6 491 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 SAMD12Q8N8I0 201 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 OR6S1Q8NH40 331 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 HSD17B8Q92506 261 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 KLHL15Q96M94 604 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 LAMP5Q9UJQ1 280 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 ZNF281Q9Y2X9 895 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 FKBP7Q9Y680 259 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 NOTOA8MTQ0 251 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 OR6A2O95222 327 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 GPANK1O95872 356 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 PAHP00439 452 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 EIF4EP06730 217 aaKnown RBP18.15■□□□□ 0.5
USP39-204ENST00000409766 NPR2P20594 1047 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 APOBEC1P41238 236 aaKnown RBP18.15■□□□□ 0.5
USP39-204ENST00000409766 SELENBP1Q13228 472 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 TRA2AQ13595 282 aaKnown RBP eCLIP18.15■□□□□ 0.5
USP39-204ENST00000409766 YIF1BQ5BJH7 314 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 FAM69BQ5VUD6 431 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 ARSKQ6UWY0 536 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 DPY19L4Q7Z388 723 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 FAM220AQ7Z4H9 259 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 OR6N2Q8NGY6 317 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 TRMT10AQ8TBZ6 339 aaKnown RBP18.15■□□□□ 0.5
USP39-204ENST00000409766 RGP1Q92546 391 aaPredicted RBP18.15■□□□□ 0.5
USP39-204ENST00000409766 PMEPA1Q969W9 287 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 RELTQ969Z4 430 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 INTS14Q96SY0 518 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 B9D1Q9UPM9 204 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 HRH3Q9Y5N1 445 aa18.15■□□□□ 0.5
USP39-204ENST00000409766 A0A0G2JMP0 313 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 A0A0X1KG70 313 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 FLRT2O43155 660 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 OR2J2O76002 312 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 EPXP11678 715 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 TMED10P49755 219 aaKnown RBP18.14■□□□□ 0.49
USP39-204ENST00000409766 EIF2B2P49770 351 aaKnown RBP18.14■□□□□ 0.49
USP39-204ENST00000409766 TPTEP56180 551 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 OR2B6P58173 313 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 HSD17B12Q53GQ0 312 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 TRIQKQ629K1 86 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 FAM199XQ6PEV8 388 aaPredicted RBP18.14■□□□□ 0.49
USP39-204ENST00000409766 YIPF7Q8N8F6 280 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 AGBL5Q8NDL9 886 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 OR4M2Q8NGB6 313 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 HAVCR2Q8TDQ0 301 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 MAP6Q96JE9 813 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 VSX1Q9NZR4 365 aaPredicted RBP18.14■□□□□ 0.49
USP39-204ENST00000409766 KLRF1Q9NZS2 232 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 WDFY4Q6ZS81 3184 aa18.14■□□□□ 0.49
USP39-204ENST00000409766 ZNF879B4DU55 563 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 ETV2O00321 342 aaPredicted RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 PIN1P1O15428 100 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 RPP14O95059 124 aaKnown RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 KRT8P05787 483 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 ATF1P18846 271 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 IL11P20809 199 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 PTGDSP41222 190 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 INSM1Q01101 510 aaPredicted RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 AGAP6Q5VW22 663 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 ZNF517Q6ZMY9 492 aaPredicted RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 AKAP14Q86UN6 197 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 UBQLNLQ8IYU4 475 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 C19orf18Q8NEA5 215 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 OR4M1Q8NGD0 313 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 ARL5BQ96KC2 179 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 AGAP4Q96P64 663 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 KCNJ15Q99712 375 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 GTPBP2Q9BX10 602 aaKnown RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.13■□□□□ 0.49
USP39-204ENST00000409766 NOX4Q9NPH5 578 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 NXT1Q9UKK6 140 aaKnown RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 VDAC3Q9Y277 283 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 TMEM14AQ9Y6G1 99 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 PSKH1P11801 424 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 SRMP19623 302 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 TALDO1P37837 337 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 CASP3P42574 277 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 RPS27P42677 84 aaKnown RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 EGR3Q06889 387 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 MRPL28Q13084 256 aaKnown RBP18.13■□□□□ 0.49
USP39-204ENST00000409766 RAB43Q86YS6 212 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 SCAIQ8N9R8 606 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 OR10G3Q8NGC4 313 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 FRRS1LQ9P0K9 344 aa18.13■□□□□ 0.49
USP39-204ENST00000409766 RALGAPA1Q6GYQ0 2036 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms