RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GFRA1P56159 465 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 ZP4Q12836 540 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 DOC2BQ14184 412 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 TIGD6Q17RP2 521 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 OR2G6Q5TZ20 316 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 HBMQ6B0K9 141 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 PXKQ7Z7A4 578 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 GGNQ86UU5 652 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 UEVLDQ8IX04 471 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 C9orf43Q8TAL5 461 aaPredicted RBP11.15□□□□□ -0.63
CHMP3-204ENST00000409727 DTNBP1Q96EV8 351 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 MND1Q9BWT6 205 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 TTTY10Q9BZA0 68 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 NMNAT2Q9BZQ4 307 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 DEFB127Q9H1M4 99 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 ADGRL4Q9HBW9 690 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 FGF20Q9NP95 211 aaPredicted RBP11.15□□□□□ -0.63
CHMP3-204ENST00000409727 NDUFA13Q9P0J0 144 aa11.15□□□□□ -0.63
CHMP3-204ENST00000409727 EXOGQ9Y2C4 368 aaKnown RBP11.15□□□□□ -0.63
CHMP3-204ENST00000409727 MRPS18CQ9Y3D5 142 aaKnown RBP11.15□□□□□ -0.63
CHMP3-204ENST00000409727 A0A1W2PNV4 684 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 PRSS37A4D1T9 235 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 AQP7P3A6NL99 342 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 C12orf71A8MTZ7 269 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 SELENOFO60613 162 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 CEACAM4O75871 244 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 GPANK1O95872 356 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 IGHMP01871 453 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 ENPP1P22413 925 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 DAP3P51398 398 aaKnown RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 CARD18P57730 90 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 CSNK2A1P68400 391 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 LGALS3BPQ08380 585 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 RNFT1Q5M7Z0 435 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 ARMC4Q5T2S8 1044 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 SYT6Q5T7P8 510 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 OTPQ5XKR4 325 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 IGFL2Q6UWQ7 119 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 SLC22A16Q86VW1 577 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 OR6V1Q8N148 313 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 ZFP62Q8NB50 900 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 GATAD2BQ8WXI9 593 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 FCGR1BQ92637 280 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 NMD3Q96D46 503 aaKnown RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 DGCR14Q96DF8 476 aaKnown RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 CRELD1Q96HD1 420 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 ALG12Q9BV10 488 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 NUAK2Q9H093 628 aa11.14□□□□□ -0.63
CHMP3-204ENST00000409727 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 CCDC86Q9H6F5 360 aaKnown RBP11.14□□□□□ -0.63
CHMP3-204ENST00000409727 ACOT7O00154 380 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 CDK2AP1O14519 115 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 CXCL13O43927 109 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 SLC16A7O60669 478 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF43P17038 809 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 LCN1P1Q5VSP4 162 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 EEF1A1P5Q5VTE0 462 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 CARD17Q5XLA6 110 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 ADCK1Q86TW2 530 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 NANOGP1Q8N7R0 232 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 OR2T4Q8NH00 348 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 ISOC1Q96CN7 298 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 SMAD5Q99717 465 aaKnown RBP11.13□□□□□ -0.63
CHMP3-204ENST00000409727 FUNDC2Q9BWH2 189 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 LDAHQ9H6V9 325 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 EXO5Q9H790 373 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 ERVK13-1Q9NX77 482 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 RSL24D1Q9UHA3 163 aaKnown RBP11.13□□□□□ -0.63
CHMP3-204ENST00000409727 EXOSC1Q9Y3B2 195 aaKnown RBP11.13□□□□□ -0.63
CHMP3-204ENST00000409727 NOX1Q9Y5S8 564 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 LIPGQ9Y5X9 500 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 TNRC6AQ8NDV7 1962 aaKnown RBP11.13□□□□□ -0.63
CHMP3-204ENST00000409727 ALPK2Q86TB3 2170 aa11.13□□□□□ -0.63
CHMP3-204ENST00000409727 PNMA8CA0A1B0GUJ8 204 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 DAPL1A0PJW8 107 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 TVP23AA6NH52 213 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 GLCEO94923 617 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 SBK2P0C263 348 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 LIMS3P0CW19 117 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 LIMS4P0CW20 117 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 TTKP33981 857 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 LIPAP38571 399 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 SLC25A1P53007 311 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 CLDN15P56746 228 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 FMODQ06828 376 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 SLC10A1Q14973 349 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 SPHARQ15513 63 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ETFDHQ16134 617 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ARMCX4Q5H9R4 360 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 BORAQ6PGQ7 559 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ESPNLQ6ZVH7 1005 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 TRILQ7L0X0 811 aa11.12□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms