RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 STRADBQ9C0K7 418 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 KLHDC2Q9Y2U9 406 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 PRR32B1ATL7 298 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 H3BML4 177 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 STK17BO94768 372 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 DKK1O94907 266 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 PTTG1O95997 202 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 HLA-DQA2P01906 255 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 AVPR2P30518 371 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 PUDPQ08623 228 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 MELKQ14680 651 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 XKRXQ6PP77 449 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 IL20RBQ6UXL0 311 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 ZNF554Q86TJ5 538 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 TPRA1Q86W33 373 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 NR2C2APQ86WQ0 139 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 KDM8Q8N371 416 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 M1APQ8TC57 530 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 KLHL15Q96M94 604 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 INTS14Q96SY0 518 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 PDCD1LG2Q9BQ51 273 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 WDR76Q9H967 626 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 TIGARQ9NQ88 270 aa18.66■□□□□ 0.58
USP39-203ENST00000409470 NSG1A0A0A6YYJ2 146 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 FAM47E-STBD1D6RA91 191 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 TMCC2O75069 709 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 AKR7A3O95154 331 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 GPANK1O95872 356 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 IGHMP01871 453 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 CD1AP06126 327 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 HNRNPCP07910 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
USP39-203ENST00000409470 OR8G3PP0DMU2 310 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 INPP5JQ15735 1006 aaPredicted RBP18.65■□□□□ 0.58
USP39-203ENST00000409470 PLPPR5Q32ZL2 321 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 ZNF684Q5T5D7 378 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 KCTD20Q7Z5Y7 419 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 YIPF7Q8N8F6 280 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 OR11G2Q8NGC1 345 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 ACOT12Q8WYK0 555 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 SNX18Q96RF0 628 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 B9D1Q9UPM9 204 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 FKBP7Q9Y680 259 aa18.65■□□□□ 0.58
USP39-203ENST00000409470 A0A1W2PPK0 400 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 ETV2O00321 342 aaPredicted RBP18.64■□□□□ 0.58
USP39-203ENST00000409470 SLC16A7O60669 478 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 RPP14O95059 124 aaKnown RBP18.64■□□□□ 0.58
USP39-203ENST00000409470 MADCAM1Q13477 382 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 PRAMEF20Q5VT98 475 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 HBMQ6B0K9 141 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 OPN5Q6U736 354 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 H1FNTQ75WM6 255 aaPredicted RBP18.64■□□□□ 0.58
USP39-203ENST00000409470 DPY19L4Q7Z388 723 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 SCAIQ8N9R8 606 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 TEX19Q8NA77 164 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 OR2M3Q8NG83 312 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 OR4K17Q8NGC6 315 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 MNTQ99583 582 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 SMAD5Q99717 465 aaKnown RBP18.64■□□□□ 0.58
USP39-203ENST00000409470 ZNF160Q9HCG1 818 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 CPNE5Q9HCH3 593 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 SERINC1Q9NRX5 453 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 VSX1Q9NZR4 365 aaPredicted RBP18.64■□□□□ 0.58
USP39-203ENST00000409470 FBXL2Q9UKC9 423 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 ADAM30Q9UKF2 790 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 IKZF2Q9UKS7 526 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 PADI1Q9ULC6 663 aa18.64■□□□□ 0.58
USP39-203ENST00000409470 RALGAPA1Q6GYQ0 2036 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 CPAMD8Q8IZJ3 1885 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 GPRIN2O60269 458 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 KRT8P05787 483 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 HLA-DOBP13765 273 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 MAP2K6P52564 334 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 TLE3Q04726 772 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 CDC20Q12834 499 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 BAK1Q16611 211 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 PYDC2Q56P42 97 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 SLC25A53Q5H9E4 307 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 PLA2G2CQ5R387 149 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 CNIH2Q6PI25 160 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 NDUFAF7Q7L592 441 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 THEM6Q8WUY1 208 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 C5orf34Q96MH7 638 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 TMEM14AQ9Y6G1 99 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 CHCHD2Q9Y6H1 151 aaPredicted RBP18.64■□□□□ 0.57
USP39-203ENST00000409470 R4GN57 208 aa18.64■□□□□ 0.57
USP39-203ENST00000409470 ALPK2Q86TB3 2170 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 MS4A18H0YCH9 400 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 ARL6IP5O75915 188 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 APOA1P02647 267 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 RPS27P42677 84 aaKnown RBP18.63■□□□□ 0.57
USP39-203ENST00000409470 OR10A3P58181 314 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 INSM1Q01101 510 aaPredicted RBP18.63■□□□□ 0.57
USP39-203ENST00000409470 MS4A18Q3C1V0 323 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 RAB11FIP2Q7L804 512 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 POC1BQ8TC44 478 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 FOXN4Q96NZ1 517 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 POTEKPQ9BYX7 375 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 CDCP1Q9H5V8 836 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 PTGES2Q9H7Z7 377 aa18.63■□□□□ 0.57
USP39-203ENST00000409470 CHST11Q9NPF2 352 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms