RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CLOCKO15516 846 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 KLF4O43474 513 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 BCL10O95999 233 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 HOXB6P17509 224 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 RRM2P31350 389 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 ROR2Q01974 943 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 CAMK2DQ13557 499 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 FHL1Q13642 323 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 ALG10Q5BKT4 473 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 BEX5Q5H9J7 111 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 FBXW10Q5XX13 1052 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 WDFY1Q8IWB7 410 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 OR13C2Q8NGS9 318 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 OR51A7Q8NH64 312 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 FAM46AQ96IP4 442 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 LURAP1Q96LR2 239 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 ALPK1Q96QP1 1244 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 CRLF2Q9HC73 371 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 NGBQ9NPG2 151 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 KRCC1Q9NPI7 259 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 ROS1P08922 2347 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 TRAV27A0A087WT01 109 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 NPIPB13A6NJU9 1138 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 NPIPB4C9JG80 1138 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 RAP2AP10114 183 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 CDH2P19022 906 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 OMPP47874 163 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 LIMS1P48059 325 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 DAP3P51398 398 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 HMGA2P52926 109 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 SH3BGRP55822 239 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 PPA1Q15181 289 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 C1QTNF12Q5T7M4 302 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 ALKBH2Q6NS38 261 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 ADGRG5Q8IZF4 528 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 OR6N1Q8NGY5 312 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 SLC25A44Q96H78 314 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 TNFRSF13CQ96RJ3 184 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 GPR35Q9HC97 309 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 TMCC3Q9ULS5 477 aa17.43■□□□□ 0.38
PDLIM2-207ENST00000409417 DHRS12A0PJE2 317 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 M0R3G1 203 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 PRPS1P60891 318 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 CBX1P83916 185 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 ACKR1Q16570 336 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 ZBED5Q49AG3 693 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 SEZ6L2Q6UXD5 910 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 HDDC2Q7Z4H3 204 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 CDC20BQ86Y33 519 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 ZNF566Q969W8 418 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 PIK3IP1Q96FE7 263 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 B3GAT2Q9NPZ5 323 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 AURKCQ9UQB9 309 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 LYVE1Q9Y5Y7 322 aa17.42■□□□□ 0.38
PDLIM2-207ENST00000409417 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 MCIDASD6RGH6 385 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 CSNK1A1P48729 337 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 NR1H2P55055 460 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 MELKQ14680 651 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 TAF11Q15544 211 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 PHYHD1Q5SRE7 291 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 ANKRD16Q6P6B7 361 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 CCDC121Q6ZUS5 278 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 ZER1Q7Z7L7 766 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 WDR31Q8NA23 367 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 LRRC75AQ8NAA5 344 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 OR1K1Q8NGR3 316 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 OR52N5Q8NH56 324 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 CANT1Q8WVQ1 401 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 TMEM54Q969K7 222 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 ZNF837Q96EG3 531 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 CHID1Q9BWS9 393 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 TXNIPQ9H3M7 391 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 SLC17A5Q9NRA2 495 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 STX18Q9P2W9 335 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 SLC25A15Q9Y619 301 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 CCDC168Q8NDH2 2452 aa17.41■□□□□ 0.38
PDLIM2-207ENST00000409417 TCRBV3S1A0A5B6 114 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 TNFRSF11BO00300 401 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 OR10H3O60404 316 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 PTP4A3O75365 173 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 IGHG1P01857 330 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 PGA4P0DJD7 388 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 PGA3P0DJD8 388 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 LOXP28300 417 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 HOXC12P31275 282 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 IFNGR2P38484 337 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 ARF1P84077 181 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 CEACAM16Q2WEN9 425 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 ARMC4Q5T2S8 1044 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 OR2T5Q6IEZ7 315 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 SPATA24Q86W54 205 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 OR2T29Q8NH02 315 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 ASB10Q8WXI3 467 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 BCL2L2Q92843 193 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 MRPL13Q9BYD1 178 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 ULBP2Q9BZM5 246 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 OBP2BQ9NPH6 170 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 GLTPQ9NZD2 209 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 SIGLEC7Q9Y286 467 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms