RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MED27Q6P2C8 311 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 ZNF620Q6ZNG0 422 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 CHST9Q7L1S5 443 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 RBM45Q8IUH3 476 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 GLB1L2Q8IW92 636 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 OR56A3Q8NH54 315 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 RPS4Y2Q8TD47 263 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 RAB24Q969Q5 203 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 MIB2Q96AX9 1013 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 FCRL4Q96PJ5 515 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 CDC6Q99741 560 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 SSX3Q99909 188 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 ZNF471Q9BX82 626 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 CXorf36Q9H7Y0 433 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 HINT3Q9NQE9 182 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 COMMD9Q9P000 198 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 NCDNQ9UBB6 729 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 IL20RAQ9UHF4 553 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 ZMIZ1Q9ULJ6 1067 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 PCDHGC4Q9Y5F7 938 aa9.73□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3DA0A087WVF3 549 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3IA0A087WXS9 549 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3EA0A087X179 549 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3KA0A087X1G2 549 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TEX13DA0A0J9YY54 714 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 METTL21EPA6NDL7 271 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3FA6NER0 549 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3LB9A6J9 549 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 F5H5T6 163 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 SULT2B1O00204 365 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TXNL1O43396 289 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 DNAJB6O75190 326 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 GLSO94925 669 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 GBAP04062 536 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CD14P08571 375 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 FAM157CP0CG43 387 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 RNH1P13489 461 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 PRG2P13727 222 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 ZNF14P17017 642 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 VAMP1P23763 118 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 NDUFS1P28331 727 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CD1CP29017 333 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CORO1AP31146 461 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CASRP41180 1078 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 KIR2DL1P43626 348 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 SLC6A9P48067 706 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 PPT1P50897 306 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 EIF5AP63241 154 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 HSD11B2P80365 405 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 FOXK2Q01167 660 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 RNASE12Q5GAN4 147 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3CQ6IPX1 549 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 PWWP2BQ6NUJ5 590 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 COMMD6Q7Z4G1 85 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 TBC1D3Q8IZP1 549 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CLDN19Q8N6F1 224 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 PNLDC1Q8NA58 520 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 OR5AP2Q8NGF4 316 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 AKR7LQ8NHP1 331 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 ASZ1Q8WWH4 475 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 GHSRQ92847 366 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 OTUB2Q96DC9 234 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 SMIM19Q96E16 107 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 PIK3IP1Q96FE7 263 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 LYSMD1Q96S90 227 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 ADAT1Q9BUB4 502 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CHST5Q9GZS9 411 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 PRDM13Q9H4Q3 707 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 ZFYVE1Q9HBF4 777 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 MARCH2Q9P0N8 246 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 KLK11Q9UBX7 282 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CRLS1Q9UJA2 301 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CLEC4EQ9ULY5 219 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 ASPMQ8IZT6 3477 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 WDFY3Q8IZQ1 3526 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 CEP295Q9C0D2 2601 aa9.72□□□□□ -0.85
NIF3L1-204ENST00000409357 OR6C76A6NM76 312 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 UPK3BL1B0FP48 263 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 UPK3BL2E5RIL1 263 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 HMGN4O00479 90 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 NPC1O15118 1278 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 MAGEB4O15481 346 aaPredicted RBP9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 IFNA17P01571 189 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 CD2P06729 351 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 AKAIN1P0CW23 69 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 RAB5AP20339 215 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 PPP2R1BP30154 601 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 RAB1AP62820 205 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 MST1LQ2TV78 715 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 GFOD2Q3B7J2 385 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 C9orf152Q5JTZ5 239 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 TMEM69Q5SWH9 247 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 AWAT2Q6E213 333 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 OR10K2Q6IF99 312 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 RPL22L1Q6P5R6 122 aaKnown RBP9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 SYT13Q7L8C5 426 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 SLC29A4Q7RTT9 530 aa9.71□□□□□ -0.85
NIF3L1-204ENST00000409357 CPOQ8IVL8 374 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms