RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 B3GAT2Q9NPZ5 323 aa14.18□□□□□ -0.14
CHMP3-203ENST00000409225 DECR2Q9NUI1 292 aa14.18□□□□□ -0.14
CHMP3-203ENST00000409225 UBAP1Q9NZ09 502 aa14.18□□□□□ -0.14
CHMP3-203ENST00000409225 PRDM4Q9UKN5 801 aa14.18□□□□□ -0.14
CHMP3-203ENST00000409225 NUP50Q9UKX7 468 aa14.18□□□□□ -0.14
CHMP3-203ENST00000409225 ZNF443Q9Y2A4 671 aaPredicted RBP14.18□□□□□ -0.14
CHMP3-203ENST00000409225 ISPDA4D126 451 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 UBL3O95164 117 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 GRPRP30550 384 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 ERVS71-1P61550 626 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 MAPK11Q15759 364 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 TSTQ16762 297 aaKnown RBP14.17□□□□□ -0.14
CHMP3-203ENST00000409225 HFEQ30201 348 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 ZNF584Q8IVC4 421 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 UEVLDQ8IX04 471 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 SYNPRQ8TBG9 265 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 EPS8L3Q8TE67 593 aaKnown RBP14.17□□□□□ -0.14
CHMP3-203ENST00000409225 POP5Q969H6 163 aaKnown RBP14.17□□□□□ -0.14
CHMP3-203ENST00000409225 TAAR8Q969N4 342 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 TESCQ96BS2 214 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 CCDC115Q96NT0 180 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 PKP2Q99959 881 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 AKTIPQ9H8T0 292 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 NKIRAS2Q9NYR9 191 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 SLC17A7Q9P2U7 560 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 FBXL3Q9UKT7 428 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 ZNF281Q9Y2X9 895 aa14.17□□□□□ -0.14
CHMP3-203ENST00000409225 CCDC154A6NI56 674 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 HPRP00739 348 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 HLA-DOBP13765 273 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 OMGP23515 440 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 GCH1P30793 250 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 ATP4BP51164 291 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 TXNL4AP83876 142 aaKnown RBP14.16□□□□□ -0.14
CHMP3-203ENST00000409225 HOXC5Q00444 222 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 GLO1Q04760 184 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 SRSF4Q08170 494 aaKnown RBP14.16□□□□□ -0.14
CHMP3-203ENST00000409225 CAMK2DQ13557 499 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 OCLNQ16625 522 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 SMU1Q2TAY7 513 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 RNF220Q5VTB9 566 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 H1FNTQ75WM6 255 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-203ENST00000409225 ZNF627Q7L945 461 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 IFT20Q8IY31 132 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 LRRC34Q8IZ02 419 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 PAQR4Q8N4S7 273 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-203ENST00000409225 TRIML2Q8N7C3 387 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 SYT14Q8NB59 555 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 MNS1Q8NEH6 495 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 DEFB108BQ8NET1 73 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 FGFBP3Q8TAT2 258 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 ST7LQ8TDW4 575 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 APOPT1Q96IL0 206 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 FOXB1Q99853 325 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 ULBP2Q9BZM5 246 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 SAP30LQ9HAJ7 183 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 SLCO1C1Q9NYB5 712 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 PLEK2Q9NYT0 353 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 BTNL2Q9UIR0 455 aa14.16□□□□□ -0.14
CHMP3-203ENST00000409225 IGLV3-9A0A075B6K5 115 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 SLC22A23A1A5C7 686 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 SERPINA5P05154 406 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 LCKP06239 509 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 CCL2P13500 99 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 ZNF250P15622 560 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 MAKP20794 623 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 S100A3P33764 101 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 PCGF2P35227 344 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 SERPINB5P36952 375 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 CDKN2CP42773 168 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 LARS2Q15031 903 aaKnown RBP14.15□□□□□ -0.14
CHMP3-203ENST00000409225 SLC9A3R2Q15599 337 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 RPS26P11Q5JNZ5 115 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-203ENST00000409225 KLF17Q5JT82 389 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-203ENST00000409225 FAM69AQ5T7M9 428 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 ZNF621Q6ZSS3 439 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 MIER2Q8N344 545 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 GLB1L3Q8NCI6 653 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-203ENST00000409225 ICA1LQ8NDH6 482 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 OR6N1Q8NGY5 312 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 CCL17Q92583 94 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 TXNDC15Q96J42 360 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 LRR1Q96L50 414 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 PANX1Q96RD7 426 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 MMP26Q9NRE1 261 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 PDP1Q9P0J1 537 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-203ENST00000409225 P2RX2Q9UBL9 471 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 LEF1Q9UJU2 399 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-203ENST00000409225 PURGQ9UJV8 347 aaKnown RBP14.15□□□□□ -0.14
CHMP3-203ENST00000409225 CHST2Q9Y4C5 530 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 AUP1Q9Y679 476 aa14.15□□□□□ -0.14
CHMP3-203ENST00000409225 E9PBE3 544 aa14.14□□□□□ -0.15
CHMP3-203ENST00000409225 MS4A18H0YCH9 400 aa14.14□□□□□ -0.15
CHMP3-203ENST00000409225 OR2T1O43869 369 aa14.14□□□□□ -0.15
CHMP3-203ENST00000409225 ZNF500O60304 480 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-203ENST00000409225 FZD7O75084 574 aa14.14□□□□□ -0.15
CHMP3-203ENST00000409225 BCHEP06276 602 aa14.14□□□□□ -0.15
CHMP3-203ENST00000409225 NQO1P15559 274 aaKnown RBP14.14□□□□□ -0.15
CHMP3-203ENST00000409225 CLNS1AP54105 237 aaKnown RBP14.14□□□□□ -0.15
CHMP3-203ENST00000409225 NME5P56597 212 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms