RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 KCNG3Q8TAE7 436 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 MACROD1Q9BQ69 325 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 OPA3Q9H6K4 179 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 ELF5Q9UKW6 265 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 ARID1BQ8NFD5 2236 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 MCRIP1C9JLW8 97 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 PLA2G10O15496 165 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 NME1P15531 152 aaKnown RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 DAP3P51398 398 aaKnown RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 HMGA2P52926 109 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 ELOCQ15369 112 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 BVESQ8NE79 360 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 NXF2Q9GZY0 626 aaKnown RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 RRAGCQ9HB90 399 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 BCL2L10Q9HD36 194 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 KLHL13Q9P2N7 655 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 URGCP-MRPS24S4R325 110 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 A0A1B0GWA3 101 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 F3P13726 295 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 C2orf27AQ580R0 203 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 TMEM201Q5SNT2 666 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 FIP1L1Q6UN15 594 aaKnown RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 LRFN5Q96NI6 719 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 POLMQ9NP87 494 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 NINQ8N4C6 2090 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 OR5K4A6NMS3 321 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 ERVH48-1M5A8F1 160 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 F10P00742 488 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 CPN1P15169 458 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 TIMP2P16035 220 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 THBS2P35442 1172 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 ZNF239Q16600 458 aaKnown RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 RBMS3Q6XE24 437 aaKnown RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 SYT9Q86SS6 491 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 STPG2Q8N412 459 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 TMEM59Q9BXS4 323 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 ZMAT3Q9HA38 289 aaKnown RBP16.31■□□□□ 0.2
SMPD4-202ENST00000409031 KLK11Q9UBX7 282 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 CBX7O95931 251 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 SSBP1Q04837 148 aaKnown RBP16.3■□□□□ 0.2
SMPD4-202ENST00000409031 ELFN2Q5R3F8 820 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 CD300LGQ6UXG3 332 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 ZNF511Q8NB15 262 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 OR5M1Q8NGP8 315 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 PPP1R1CQ8WVI7 109 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 NDUFB6O95139 128 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 MT-ND4LP03901 98 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 SMIM6P0DI80 62 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 NQO2P16083 231 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 SLC25A35Q3KQZ1 300 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 B3GNTL1Q67FW5 361 aaPredicted RBP16.3■□□□□ 0.2
SMPD4-202ENST00000409031 Q6ZRG5 221 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 RNF165Q6ZSG1 346 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 KLHDC9Q8NEP7 349 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 MARVELD3Q96A59 401 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 RNF170Q96K19 258 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 PCDHB10Q9UN67 800 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 A0A0B4J203 849 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 DCTN6O00399 190 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 GPR75O95800 540 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 ABHD12BQ7Z5M8 362 aaPredicted RBP16.3■□□□□ 0.2
SMPD4-202ENST00000409031 OR4D6Q8NGJ1 314 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 POC1BQ8TC44 478 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 REV1Q9UBZ9 1251 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 HSBP1L1C9JCN9 74 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 NSA2O95478 260 aaKnown RBP16.3■□□□□ 0.2
SMPD4-202ENST00000409031 SLC2A10O95528 541 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 CTHP32929 405 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 LIPNQ5VXI9 398 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 OLIG3Q7RTU3 272 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 RBMXL1Q96E39 390 aaKnown RBP16.3■□□□□ 0.2
SMPD4-202ENST00000409031 PHYHIPLQ96FC7 376 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 WDR92Q96MX6 357 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 GPR174Q9BXC1 333 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 ASH2LQ9UBL3 628 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 PHLPP1O60346 1717 aa16.3■□□□□ 0.2
SMPD4-202ENST00000409031 HEPACAM2A8MVW5 462 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 CDK2AP1O14519 115 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 F13BP05160 661 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 CHRM2P08172 466 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 CD14P08571 375 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 CYHR1Q6ZMK1 362 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 RHOFQ9HBH0 211 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 KDM4EB2RXH2 506 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-202ENST00000409031 PLPP1O14494 284 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 APBB3O95704 486 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 PSMB5P28074 263 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 SDHAP31040 664 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 ECI1P42126 302 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 SERTAD2Q14140 314 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 CLEC9AQ6UXN8 241 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 SLC22A24Q8N4F4 322 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 SLC5A10A0PJK1 596 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 IGHA2P01877 340 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 HEXBP07686 556 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 P2RX1P51575 399 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 CDK3Q00526 305 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 ZNF74Q16587 644 aa16.29■□□□□ 0.2
SMPD4-202ENST00000409031 FAM27D1Q5T7N8 215 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms