RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LOC100653049A0A140TA62 436 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 ZNF726A6NNF4 738 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 MRASO14807 208 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 KRT34O76011 436 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 HLA-HP01893 362 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 TP53P04637 393 aaPredicted RBP16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 VIMP08670 466 aaKnown RBP16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 IFNGR1P15260 489 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 DSCR9P59020 149 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 GUCY1A3Q02108 690 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 SNX32Q86XE0 403 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 OR6N1Q8NGY5 312 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 FAM168AQ92567 244 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 SORCS2Q96PQ0 1159 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 SH3GL1Q99961 368 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 PRSS27Q9BQR3 290 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 ZNF426Q9BUY5 554 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 NOX3Q9HBY0 568 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 MOV10Q9HCE1 1003 aaKnown RBP16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 B3GNT2Q9NY97 397 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 SH3GLB1Q9Y371 365 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 RTTNQ86VV8 2226 aa16.73■□□□□ 0.27
SMARCB1-204ENST00000407422 CD5LO43866 347 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 SHOX2O60902 331 aaPredicted RBP16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 F12P00748 615 aaPredicted RBP16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 ARR3P36575 388 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 BIDP55957 195 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 SNRPD2P62316 118 aaKnown RBP16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 COQ5Q5HYK3 327 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 CARM1Q86X55 608 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 ZNF583Q96ND8 569 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 ULBP2Q9BZM5 246 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 NANSQ9NR45 359 aa16.72■□□□□ 0.27
SMARCB1-204ENST00000407422 IGHV2OR16-5A0A0B4J2B6 119 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 CRLF1O75462 422 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 OR6A2O95222 327 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 B4GALT1P15291 398 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 PIGFQ07326 219 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 ZNF813Q6ZN06 617 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 CCDC36Q8IYA8 594 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 ANKS4BQ8N8V4 417 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 OR4F15Q8NGB8 312 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 C10orf105Q8TEF2 133 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 C10orf82Q8WW14 230 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 RASSF5Q8WWW0 418 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 PROX1Q92786 737 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 MPP4Q96JB8 637 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 B3GAT2Q9NPZ5 323 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 MEPEQ9NQ76 525 aaPredicted RBP16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 YAE1D1Q9NRH1 226 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 POFUT2Q9Y2G5 429 aa16.71■□□□□ 0.27
SMARCB1-204ENST00000407422 BBIP1A8MTZ0 92 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 B9A039 149 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 NPPAP01160 153 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 THBS4P35443 961 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 CSNK1A1P48729 337 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 SLC35D2Q76EJ3 337 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 ZNF627Q7L945 461 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 SLC46A3Q7Z3Q1 461 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 NUP37Q8NFH4 326 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 MS4A3Q96HJ5 214 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 TNFRSF13CQ96RJ3 184 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 VRK1Q99986 396 aaPredicted RBP16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 MRGBPQ9NV56 204 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 ZNF224Q9NZL3 707 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 ARMCX1Q9P291 453 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 COL6A5A8TX70 2615 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 RNF13O43567 381 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 PDE5AO76074 875 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 ASAH2BP0C7U1 165 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 CD79AP11912 226 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 OR1E2P47887 323 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 ZP4Q12836 540 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 MELKQ14680 651 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 MAPRE2Q15555 327 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 EFNB3Q15768 340 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 TMEM249Q2WGJ8 235 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 DEF8Q6ZN54 512 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 NKAIN4Q8IVV8 208 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 OR6X1Q8NH79 312 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 FOXB1Q99853 325 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 SLC19A3Q9BZV2 496 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 PLK3Q9H4B4 646 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 ZNF229Q9UJW7 825 aa16.7■□□□□ 0.26
SMARCB1-204ENST00000407422 MALRD1Q5VYJ5 2156 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 TLX2O43763 284 aaPredicted RBP16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 UMPSP11172 480 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 SLC25A16P16260 332 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 LOXL1Q08397 574 aaPredicted RBP16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 PIN1Q13526 163 aaPredicted RBP16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 GSG1Q2KHT4 349 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 PFN4Q8NHR9 129 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 TMEM54Q969K7 222 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 ZNF75AQ96N20 296 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 ZNF442Q9H7R0 627 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 BAG5Q9UL15 447 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 MXRA5Q9NR99 2828 aa16.69■□□□□ 0.26
SMARCB1-204ENST00000407422 HIST1H2ABP04908 130 aa16.68■□□□□ 0.26
SMARCB1-204ENST00000407422 ZNF14P17017 642 aaPredicted RBP16.68■□□□□ 0.26
SMARCB1-204ENST00000407422 UGT2B15P54855 530 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms