RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 DPTQ07507 201 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 SREBF2Q12772 1141 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 SFRP4Q6FHJ7 346 aaPredicted RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 GPR137CQ8N3F9 429 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 C10orf53Q8N6V4 93 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 UBAC2Q8NBM4 344 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 DPH1Q9BZG8 443 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 EGLN1Q9GZT9 426 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 OR51V1Q9H2C8 321 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 SIDT1Q9NXL6 827 aaKnown RBP14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 ATG4BQ9Y4P1 393 aa14.84□□□□□ -0.03
COL4A3BP-204ENST00000405807 COL4A3Q01955 1670 aa14.83□□□□□ -0.03
COL4A3BP-204ENST00000405807 A0A1W2PPV9 198 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR2AT4A6NND4 320 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ARL6IP5O75915 188 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 RHOP08100 348 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 MC3RP41968 323 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR12D2P58182 307 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 RSU1Q15404 277 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 KCNMB1Q16558 191 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 RNASE10Q5GAN6 216 aaKnown RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 RPTNQ6XPR3 784 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ADAMTS15Q8TE58 950 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 RAB24Q969Q5 203 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ACTRT3Q9BYD9 372 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 TLNRD1Q9H1K6 362 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 BARX1Q9HBU1 254 aaPredicted RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 RNF186Q9NXI6 227 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF443Q9Y2A4 671 aaPredicted RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 EREGO14944 169 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 SPINT1O43278 529 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 IGF2P01344 180 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 MRPL3P09001 348 aaKnown RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF888P0CJ79 500 aaPredicted RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 PTNP21246 168 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 PYCR1P32322 319 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 UQCC3Q6UW78 93 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ESPNLQ6ZVH7 1005 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR11G2Q8NGC1 345 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR2L8Q8NGY9 312 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF671Q8TAW3 534 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 C14orf79Q96F83 325 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 AICDAQ9GZX7 198 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 MTHFD2LQ9H903 347 aaPredicted RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 NPDC1Q9NQX5 325 aaPredicted RBP14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 NANSQ9NR45 359 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 CMC2Q9NRP2 79 aa14.83□□□□□ -0.04
COL4A3BP-204ENST00000405807 COL4A6Q14031 1691 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 A0A1B0GUH1 482 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 CDHR4A6H8M9 788 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 NAP1L6A6NFF2 107 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 ITGB1BP1O14713 200 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 ARPC5O15511 151 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 EFSO43281 561 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 RCBTB2O95199 551 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 PMP2P02689 132 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 SDHBP21912 280 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 HIST1H1TP22492 207 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 PDX1P52945 283 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 GMFBP60983 142 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF85Q03923 595 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 MTFR2Q6P444 385 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 Q6ZTK2 550 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC24A4Q8NFF2 622 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 SMPDL3BQ92485 455 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC39A7Q92504 469 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 LCORQ96JN0 433 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 FLVCR2Q9UPI3 526 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 MRPS18CQ9Y3D5 142 aaKnown RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 PCYT1BQ9Y5K3 369 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 NPIPB9F8W1W9 429 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 ERI3O43414 337 aaKnown RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 HCRTR2O43614 444 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 NXPH2O95156 264 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZIC2O95409 532 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 GSTP1P09211 210 aaKnown RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 RCC1P18754 421 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 CNR1P21554 472 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 CSNK1EP49674 416 aaKnown RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 AP3S2P59780 193 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 INPP5JQ15735 1006 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 COL13A1Q5TAT6 717 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC48A1Q6P1K1 146 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 RAB42Q8N4Z0 105 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 ACOT4Q8N9L9 421 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC35A4Q96G79 324 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 CCDC74BQ96LY2 380 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR10A4Q9H209 315 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 PIGMQ9H3S5 423 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 AUNIPQ9H7T9 357 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 HRASLSQ9HDD0 168 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 NTMQ9P121 344 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF629Q9UEG4 869 aaPredicted RBP14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC23A2Q9UGH3 650 aa14.82□□□□□ -0.04
COL4A3BP-204ENST00000405807 PTBP3O95758 552 aaKnown RBP14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 AIFM1O95831 613 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 PRNPP04156 253 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 TYRP1P17643 537 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms