RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CASC10Q5T4H9 136 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 SASS6Q6UVJ0 657 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 C6orf89Q6UWU4 347 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 Q6ZSR3 168 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 SLC25A48Q6ZT89 311 aaKnown RBP2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 TTC5Q8N0Z6 440 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 SLC34A3Q8N130 599 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 MS4A15Q8N5U1 240 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 HSD17B11Q8NBQ5 300 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 B3GNT7Q8NFL0 401 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR1S2Q8NGQ3 325 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR5B3Q8NH48 314 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 SGK3Q96BR1 496 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 DEFB127Q9H1M4 99 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 NCOR1P1Q9H4R4 102 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 UGT1A7Q9HAW7 530 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 UGT1A10Q9HAW8 530 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 UGT1A8Q9HAW9 530 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 EML4Q9HC35 981 aaKnown RBP2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 PTTG3PQ9NZH4 202 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 DEC1Q9P2X7 70 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 LSM7Q9UK45 103 aaKnown RBP2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 TRAPPC4Q9Y296 219 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 HEBP2Q9Y5Z4 205 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 CNTNAP1P78357 1384 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 CIB4A0PJX0 185 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 C12orf71A8MTZ7 269 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ERVV-1B6SEH8 477 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 DNALI1O14645 258 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 CRYGBP07316 175 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF43P17038 809 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 RCC1P18754 421 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 TCN1P20061 433 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 PRDX3P30048 256 aaKnown RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 RORAP35398 523 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 NUDT1P36639 197 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 VHLP40337 213 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 CDKN1BP46527 198 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 RPS10P46783 165 aaKnown RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 RORCP51449 518 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ACLYP53396 1101 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 FGF8P55075 233 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 CDH6P55285 790 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 SH3BGRP55822 239 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ACTA2P62736 377 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ACTG2P63267 376 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ACTC1P68032 377 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ACTA1P68133 377 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 PPP1R7Q15435 360 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 LRRC10Q5BKY1 277 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 SOHLH1Q5JUK2 328 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 LY6G6FQ5SQ64 297 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 LRRC66Q68CR7 880 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 SLC8B1Q6J4K2 584 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCDC73Q6ZRK6 1079 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 LHFPL3Q86UP9 236 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 SDR42E1Q8WUS8 393 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 SLC29A1Q99808 456 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 RIOK2Q9BVS4 552 aaKnown RBP2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR11A1Q9GZK7 315 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 MFFQ9GZY8 342 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 CWH43Q9H720 699 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 NANOGQ9H9S0 305 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 IL26Q9NPH9 171 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 MMP26Q9NRE1 261 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 RPS6KB2Q9UBS0 482 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 ARHGAP23Q9P227 1491 aa2.63□□□□□ -1.99
HMGB1P17-201ENST00000403495 A0A0G2JN53 185 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 LRRIQ4A6NIV6 560 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 F6UB75 175 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 H0YC42 278 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 CASQ2O14958 399 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 CLIC3O95833 236 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 FGF1P05230 155 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 CSF3P09919 207 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 GKN3PP0CG01 181 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 FOLR1P15328 257 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 IFNA8P32881 189 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 HSD17B2P37059 387 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 GPR6P46095 362 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 YAP1P46937 504 aaKnown RBP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 SUB1P53999 127 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 PRRX1P54821 245 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 FBXW4P57775 412 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 GPX6P59796 221 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 ERVK-25P63136 954 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 VPS26BQ4G0F5 336 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 C2orf83Q53S99 150 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 METAP1DQ6UB28 335 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF621Q6ZSS3 439 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 LINC00173Q6ZV60 143 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 EID2Q8N6I1 236 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR4F15Q8NGB8 312 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 LRRC58Q96CX6 371 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 DNAJC19Q96DA6 116 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR2M2Q96R28 347 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 ATP5SQ99766 215 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 HDHD3Q9BSH5 251 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 NEUROG2Q9H2A3 272 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 MRPL47Q9HD33 250 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms