RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 ADAP00813 363 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 TP53P04637 393 aaPredicted RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 ZNF26P17031 533 aaPredicted RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 FUT1P19526 365 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 KLK2P20151 261 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 ENPP1P22413 925 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 IFNGR2P38484 337 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 ART1P52961 327 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 OR2B6P58173 313 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 PPP2R2BQ00005 443 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 COX10Q12887 443 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 RNPS1Q15287 305 aaKnown RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 MS4A18Q3C1V0 323 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 PPP4R4Q6NUP7 873 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 FCRLAQ7L513 359 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 PXKQ7Z7A4 578 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 AMIGO2Q86SJ2 522 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 HIPK1Q86Z02 1210 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 LRRC17Q8N6Y2 441 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 CLDN22Q8N7P3 220 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 TMEM99Q8N816 258 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 LRRC75AQ8NAA5 344 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 OR10G2Q8NGC3 310 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 OR9Q2Q8NGE9 314 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 GIPC3Q8TF64 312 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 DNAJC9Q8WXX5 260 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 STMN2Q93045 179 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 INTS12Q96CB8 462 aaKnown RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 ZHX1-C8orf76Q96EF9 292 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 C14orf79Q96F83 325 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 GMPPAQ96IJ6 420 aaPredicted RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 FAM46AQ96IP4 442 aaKnown RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 TM9SF2Q99805 663 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 TACO1Q9BSH4 297 aaKnown RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 NAA11Q9BSU3 229 aaPredicted RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 TAPBPLQ9BX59 468 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 ASPNQ9BXN1 380 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 POLDIP3Q9BY77 421 aaKnown RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 SRA1Q9HD15 236 aaKnown RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 KRCC1Q9NPI7 259 aaPredicted RBP8.15□□□□□ -1.1
VPS53-203ENST00000401468 SEC14L4Q9UDX3 406 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 MGAT4BQ9UQ53 548 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 RASD1Q9Y272 281 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 U3KQV3 271 aa8.15□□□□□ -1.1
VPS53-203ENST00000401468 EFCAB9A8MZ26 197 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 E9PQ18 207 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 G3V2T6 193 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 GNGT2O14610 69 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 OR10H3O60404 316 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 AKR7A3O95154 331 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 SYNGR4O95473 234 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 IL18BPO95998 194 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 HPRP00739 348 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 GASTP01350 101 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 IGHMP01871 453 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 ANXA8P13928 327 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 ANPEPP15144 967 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 PTNP21246 168 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 KIR2DL3P43628 341 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 GPR4P46093 362 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 PRPS1P60891 318 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 SIRPAP78324 504 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 PUDPQ08623 228 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 PPP1R8Q12972 351 aaKnown RBP8.14□□□□□ -1.11
VPS53-203ENST00000401468 RCN1Q15293 331 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 ZBED5Q49AG3 693 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 OTUD3Q5T2D3 398 aaPredicted RBP8.14□□□□□ -1.11
VPS53-203ENST00000401468 KDM4DQ6B0I6 523 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 OR2A2Q6IF42 318 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 ZNF620Q6ZNG0 422 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 RASSF6Q6ZTQ3 369 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 RRM2BQ7LG56 351 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 ZDHHC13Q8IUH4 622 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 CDK20Q8IZL9 346 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 HS3ST5Q8IZT8 346 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 PARP8Q8N3A8 854 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 ZIC4Q8N9L1 334 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 AQP11Q8NBQ7 271 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 GNPDA2Q8TDQ7 276 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 ABHD3Q8WU67 409 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 TMEM45BQ96B21 275 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 OXGR1Q96P68 337 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 FEVQ99581 238 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 NIPSNAP1Q9BPW8 284 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 IL20Q9NYY1 176 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 USE1Q9NZ43 259 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 PDP1Q9P0J1 537 aaPredicted RBP8.14□□□□□ -1.11
VPS53-203ENST00000401468 KLHL9Q9P2J3 617 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 KLHL13Q9P2N7 655 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 REV1Q9UBZ9 1251 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 OAZ3Q9UMX2 235 aa8.14□□□□□ -1.11
VPS53-203ENST00000401468 MAGED1Q9Y5V3 778 aaPredicted RBP8.14□□□□□ -1.11
VPS53-203ENST00000401468 IGHV3-15A0A0B4J1V0 119 aa8.13□□□□□ -1.11
VPS53-203ENST00000401468 UNC119BA6NIH7 251 aa8.13□□□□□ -1.11
VPS53-203ENST00000401468 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
VPS53-203ENST00000401468 GPR171O14626 319 aa8.13□□□□□ -1.11
VPS53-203ENST00000401468 TRAF3IP2O43734 574 aaPredicted RBP8.13□□□□□ -1.11
VPS53-203ENST00000401468 E2F6O75461 281 aa8.13□□□□□ -1.11
VPS53-203ENST00000401468 TNFSF13O75888 250 aa8.13□□□□□ -1.11
VPS53-203ENST00000401468 CGAP01215 116 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms