RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MBD6Q96DN6 1003 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 BOD1Q96IK1 185 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ALPK1Q96QP1 1244 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CCL19Q99731 98 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 AMDHD2Q9Y303 409 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HIVEP1P15822 2718 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RAI1Q7Z5J4 1906 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ITPR3Q14573 2671 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CD40P25942 277 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IQCCQ4KMZ1 466 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ANKRD16Q6P6B7 361 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 KLHL24Q6TFL4 600 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TMEM108Q6UXF1 575 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SPNS3Q6ZMD2 512 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 OR6N1Q8NGY5 312 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SLC7A13Q8TCU3 470 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ACOT11Q8WXI4 607 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PYURFQ96I23 114 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 LRR1Q96L50 414 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CXXC4Q9H2H0 198 aa12.32□□□□□ -0.44
HLA-DQB1-202ENST00000399079 DSCAMO60469 2012 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 F8P00451 2351 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF503-AS2A6NEH8 195 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 BCL10O95999 233 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SEMG1P04279 462 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RHCEP18577 417 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PTAFRP25105 342 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CSNK1A1P48729 337 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SH3BGRP55822 239 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PRKCDQ05655 676 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RUNX1T1Q06455 604 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF672Q499Z4 452 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SLC22A25Q6T423 547 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 KLHL17Q6TDP4 642 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CYP2R1Q6VVX0 501 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 C20orf204Q6ZNR8 217 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CYP4Z1Q86W10 505 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF611Q8N823 705 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 OR6X1Q8NH79 312 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PIGTQ969N2 578 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ULBP2Q9BZM5 246 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 LAMP3Q9UQV4 416 aa12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 FAM32AQ9Y421 112 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TEP1Q99973 2627 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TRAV27A0A087WT01 109 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 A0A1W2PRG6 482 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF99A8MXY4 864 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CDC42EP2O14613 210 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PDE5AO76074 875 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 WNT11O96014 354 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 H1F0P07305 194 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SOD3P08294 240 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SAGP10523 405 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 GPR4P46093 362 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 UBE2NP61088 152 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 FHL1Q13642 323 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 FGD3Q5JSP0 725 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PODNL1Q6PEZ8 512 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MBOAT2Q6ZWT7 520 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TRPM8Q7Z2W7 1104 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 OR52J3Q8NH60 311 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 OR51A7Q8NH64 312 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 FBXW5Q969U6 566 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF566Q969W8 418 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SLC25A44Q96H78 314 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ADAD1Q96M93 576 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 B3GAT2Q9NPZ5 323 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TAS2R1Q9NYW7 299 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 GLTPQ9NZD2 209 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HIF3AQ9Y2N7 669 aa12.3□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TRBV4-1A0A0J9YWV2 114 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 A0A1W2PRQ8 180 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MCIDASD6RGH6 385 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PGA4P0DJD7 388 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PGA3P0DJD8 388 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 B4GALT1P15291 398 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ATP6V1B2P21281 511 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CDH11P55287 796 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RPS4XP62701 263 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 DGCR6Q14129 220 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SEC23BQ15437 767 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PGGHGQ32M88 737 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SPATS1Q496A3 300 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ALG10Q5BKT4 473 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 LRFN4Q6PJG9 635 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RRM2BQ7LG56 351 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IGFN1Q86VF2 1251 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RNF113BQ8IZP6 322 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SYT14Q8NB59 555 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 OR13C2Q8NGS9 318 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MAGEE2Q8TD90 523 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SMAP2Q8WU79 429 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IGFBPL1Q8WX77 278 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms