RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 GRINAQ7Z429 371 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 MAVSQ7Z434 540 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 GCNT2Q8N0V5 402 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 C15orf54Q8N8G6 183 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 OR6K3Q8NGY3 331 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 RNF170Q96K19 258 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 SLC25A32Q9H2D1 315 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 RANGRFQ9HD47 186 aaPredicted RBP7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 STARD5Q9NSY2 213 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 SERTAD4Q9NUC0 356 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 OR52A1Q9UKL2 312 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 CD14P08571 375 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 DBHP09172 617 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 S100A11P31949 105 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 ESCO2Q56NI9 601 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 OR7E24Q6IFN5 339 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 LHFPL2Q6ZUX7 228 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 TAS1R1Q7RTX1 841 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 ADIPOR2Q86V24 386 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 LAX1Q8IWV1 398 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 TMEM178AQ8NBL3 297 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 OR5T1Q8NG75 326 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 GHSRQ92847 366 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 ABHD6Q9BV23 337 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 SAMD10Q9BYL1 202 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 GLIPR2Q9H4G4 154 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 QPCTLQ9NXS2 382 aa7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 TIMM8BQ9Y5J9 83 aaPredicted RBP7.73□□□□□ -1.17
SPTLC3-201ENST00000399002 OR6C65A6NJZ3 312 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 HLA-DOBP13765 273 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PSMB5P28074 263 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 GJA4P35212 333 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 RGRP47804 291 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 OR1D4P47884 311 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 P2RX1P51575 399 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 SEC61A1P61619 476 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 MBTPS1Q14703 1052 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 FAM78AQ5JUQ0 283 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 ABHD17CQ6PCB6 329 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 B3GLCTQ6Y288 498 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 LYSMD2Q8IV50 215 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 LGI3Q8N145 548 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 KIAA1958Q8N8K9 716 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 KLHDC9Q8NEP7 349 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 LKAAEAR1Q8TD35 194 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 ELSPBP1Q96BH3 223 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PIGMQ9H3S5 423 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 GALNT9Q9HCQ5 603 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 FBXO8Q9NRD0 319 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 VSX1Q9NZR4 365 aaPredicted RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 TRAPPC2LQ9UL33 140 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PCDHGA1Q9Y5H4 931 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 HEMK1Q9Y5R4 338 aaPredicted RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 SNX11Q9Y5W9 270 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 KPTNQ9Y664 436 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PRAMEF25A6NGN4 478 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 CHRM4P08173 479 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 SNRNP70P08621 437 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PRKACAP17612 351 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 RPL35P42766 123 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 SLC6A11P48066 632 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 FAPQ12884 760 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PRICKLE2Q7Z3G6 844 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PLPP5Q8NEB5 264 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 GJC3Q8NFK1 279 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 MS4A4AQ96JQ5 239 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 TECTBQ96PL2 329 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 SMCO4Q9NRQ5 59 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 MN1Q10571 1320 aaPredicted RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 TRABD2BA6NFA1 517 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 MEIS3P2A8K0S8 358 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 K7EQM0 130 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 OR2F2O95006 317 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 LGI1O95970 557 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 LIM2P55344 173 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 RPL27P61353 136 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 RPS18P62269 152 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 CDC20Q12834 499 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 MFAP5Q13361 173 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 OR2F1Q13607 317 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PAN3Q58A45 887 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 STEAP3Q658P3 488 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 FBXW12Q6X9E4 464 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 DPY19L4Q7Z388 723 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 ZNF808Q8N4W9 903 aaPredicted RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 FAM3DQ96BQ1 224 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 MED30Q96HR3 178 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 SLAMF7Q9NQ25 335 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 HCFC1R1Q9NWW0 138 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 MYEF2Q9P2K5 600 aaKnown RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PCDHB10Q9UN67 800 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 NHSQ6T4R5 1651 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 A0A1B0GWA3 101 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 KDM4EB2RXH2 506 aaPredicted RBP7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 FBXO45P0C2W1 286 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 LAP3P28838 519 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 PTGER4P35408 488 aa7.72□□□□□ -1.17
SPTLC3-201ENST00000399002 TGM4P49221 684 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms