RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 EDEM2Q9BV94 578 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 C12orf10Q9HB07 376 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SIDT1Q9NXL6 827 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 POMT2Q9UKY4 750 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TIMM10BQ9Y5J6 103 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SPTBN2O15020 2390 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 A0A1W2PP55 124 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 HTR3BO95264 441 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 NADKO95544 446 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 CNOT4O95628 575 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 GAAP10253 952 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CD79AP11912 226 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TIMP2P16035 220 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 NCK1P16333 377 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 GABRB3P28472 473 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 LGALS7P47929 136 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 FASLGP48023 281 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 NKX6-1P78426 367 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 HES1Q14469 280 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ZNF239Q16600 458 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 LRIT3Q3SXY7 679 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 NKAIN1Q4KMZ8 207 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DOK3Q7L591 496 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 LDB1Q86U70 411 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 TMPRSS12Q86WS5 348 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SIAH1Q8IUQ4 282 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ERI1Q8IV48 349 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 STPG3Q8N7X2 389 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 POM121Q96HA1 1249 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 HYLS1Q96M11 299 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 EIF5A2Q9GZV4 153 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 ATG5Q9H1Y0 275 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 OR51V1Q9H2C8 321 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 GAREM1Q9H706 876 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SNTG1Q9NSN8 517 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CNOT1A5YKK6 2376 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 EML5Q05BV3 1969 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TRBV11-1A0A0K0K1C0 115 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 A0A1W2PPV4 95 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PRAMEF25A6NGN4 478 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 C11orf98E9PRG8 122 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 H0YIV9 168 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 H7BY64 318 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 VILLO15195 856 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CYTIPO60759 359 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PRAMEF4O60810 478 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PRKRAO75569 313 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 NRASP01111 189 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 OPN1SWP03999 348 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 GP2P55259 537 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 BNIP3Q12983 259 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SIX1Q15475 284 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 TOMM34Q15785 309 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 PRAMEF9Q5VWM5 478 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DBX2Q6ZNG2 339 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PGBD5Q8N414 524 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SPICQ8N5J4 248 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DMBX1Q8NFW5 382 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 OR51T1Q8NGJ9 327 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PYDC1Q8WXC3 89 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CLEC4DQ8WXI8 215 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 RSPRY1Q96DX4 576 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 OR6C1Q96RD1 312 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MCHR1Q99705 422 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 APOOQ9BUR5 198 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 KATNB1Q9BVA0 655 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 GNB4Q9HAV0 340 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DUSP22Q9NRW4 184 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 NPFFR2Q9Y5X5 522 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MED12LQ86YW9 2145 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MYADML2A6NDP7 307 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CPSF4LA6NMK7 179 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 ANKRD63C9JTQ0 380 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 J3KR12 359 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PHF1O43189 567 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 TPST2O60704 377 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PPP1R11O60927 126 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 OR4F21O95013 312 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CHRM5P08912 532 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 GSTP1P09211 210 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 DHRS4L1P0CG22 281 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 RRASP10301 218 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PVRP15151 417 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 NME1P15531 152 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 GNB3P16520 340 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ZNF26P17031 533 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 LMO2P25791 158 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DPP4P27487 766 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CD34P28906 385 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SLC11A1P49279 550 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MTPNP58546 118 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 RNFT1Q5M7Z0 435 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 GGNBP1Q5YKI7 109 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 EPGNQ6UW88 154 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TMEM107Q6UX40 140 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TFAP2EQ6VUC0 442 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 RFPL4BQ6ZWI9 263 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 COMMD6Q7Z4G1 85 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 BEST3Q8N1M1 668 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PIGTQ969N2 578 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms