RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 LCN8Q6JVE9 175 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 ZNF704Q6ZNC4 412 aaPredicted RBP12.52□□□□□ -0.41
HDDC2-202ENST00000398153 DHFR2Q86XF0 187 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 NRMQ8IXM6 262 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 WDR31Q8NA23 367 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 OR52N5Q8NH56 324 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 SLC7A13Q8TCU3 470 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 BCL2L2Q92843 193 aaPredicted RBP12.52□□□□□ -0.41
HDDC2-202ENST00000398153 PIGTQ969N2 578 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 ZNF566Q969W8 418 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 ASB9Q96DX5 294 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 TXNDC15Q96J42 360 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 EMC6Q9BV81 110 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 NDEL1Q9GZM8 345 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 MAGIXQ9H6Y5 334 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 INIPQ9NRY2 104 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 POLQO75417 2590 aa12.52□□□□□ -0.41
HDDC2-202ENST00000398153 OTOGQ6ZRI0 2925 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 CSMD1Q96PZ7 3565 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 GYG2O15488 501 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 KRT36O76013 467 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 ATE1O95260 518 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 CSNK1A1P48729 337 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 RASSF2P50749 326 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 UBE2NP61088 152 aaKnown RBP12.51□□□□□ -0.41
HDDC2-202ENST00000398153 BSPH1Q075Z2 132 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 CAMK2DQ13557 499 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 CEACAM16Q2WEN9 425 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 TBRG1Q3YBR2 411 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 ALG10Q5BKT4 473 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 C9orf135Q5VTT2 229 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 LINGO2Q7L985 606 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 OAFQ86UD1 273 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 FAM86B1Q8N7N1 296 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 OR6N1Q8NGY5 312 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 FNDC8Q8TC99 324 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 TMEM54Q969K7 222 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 ALPK1Q96QP1 1244 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 SEPHS2Q99611 448 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 FOXC2Q99958 501 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 DENND2DQ9H6A0 471 aaPredicted RBP12.51□□□□□ -0.41
HDDC2-202ENST00000398153 GLTPQ9NZD2 209 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 SPG11Q96JI7 2443 aa12.51□□□□□ -0.41
HDDC2-202ENST00000398153 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 EFCAB9A8MZ26 197 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 hCG_2039718K7EN88 272 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 M0R3G1 203 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 HS3ST1O14792 307 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 CLOCKO15516 846 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 PIP5K1CO60331 668 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 SERPINI2O75830 405 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 ATP5HO75947 161 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 UBOX5O94941 541 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 IGHG1P01857 330 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 IGHMP01871 453 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 CDH2P19022 906 aaPredicted RBP12.5□□□□□ -0.41
HDDC2-202ENST00000398153 AQP2P41181 271 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 IST1P53990 364 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 ARF1P84077 181 aaKnown RBP12.5□□□□□ -0.41
HDDC2-202ENST00000398153 LGALS3BPQ08380 585 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 HIST3H3Q16695 136 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 FAM205BPQ63HN1 556 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 ALKBH2Q6NS38 261 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 PODNL1Q6PEZ8 512 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 LINC00471Q8N535 108 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 ZNF611Q8N823 705 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 NRGNQ92686 78 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 BTBD10Q9BSF8 475 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 MRPL13Q9BYD1 178 aaKnown RBP12.5□□□□□ -0.41
HDDC2-202ENST00000398153 ULBP2Q9BZM5 246 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 TXNIPQ9H3M7 391 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 LIME1Q9H400 295 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 BEX4Q9NWD9 120 aaPredicted RBP12.5□□□□□ -0.41
HDDC2-202ENST00000398153 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 POFUT2Q9Y2G5 429 aa12.5□□□□□ -0.41
HDDC2-202ENST00000398153 RAI1Q7Z5J4 1906 aaPredicted RBP12.49□□□□□ -0.41
HDDC2-202ENST00000398153 MCIDASD6RGH6 385 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 GADD45GO95257 159 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 F13BP05160 661 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 PGA4P0DJD7 388 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 PGA3P0DJD8 388 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 CD53P19397 219 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 MAKP20794 623 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 CD40P25942 277 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 IFNGR2P38484 337 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 MAGEA2P43356 314 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 HMGA2P52926 109 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 FOXD4Q12950 439 aaPredicted RBP12.49□□□□□ -0.41
HDDC2-202ENST00000398153 GK3PQ14409 553 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 ZBED5Q49AG3 693 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 HIKESHIQ53FT3 197 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 FGD3Q5JSP0 725 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 ARMC4Q5T2S8 1044 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 CARD17Q5XLA6 110 aa12.49□□□□□ -0.41
HDDC2-202ENST00000398153 CYP2R1Q6VVX0 501 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms