RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ITGA5P08648 1049 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 COX5AP20674 150 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 IL32P24001 234 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 FPR3P25089 353 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 RPL4P36578 427 aaKnown RBP22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 FXYD6P3P58550 94 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 PRPS1P60891 318 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 ANKDD1AQ495B1 522 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 AQP11Q8NBQ7 271 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 GNPDA2Q8TDQ7 276 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 S100PBPQ96BU1 408 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 DUS3LQ96G46 650 aaKnown RBP22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 WFIKKN1Q96NZ8 548 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 ACTR6Q9GZN1 396 aa22.35■■□□□ 1.17
TMEM55B-202ENST00000398020 PDLIM1O00151 329 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 RAD51DO75771 328 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 GSSP48637 474 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 RUNX1T1Q06455 604 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 THSD4Q6ZMP0 1018 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 BHLHA15Q7RTS1 189 aaPredicted RBP22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 HS3ST5Q8IZT8 346 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 GPR137CQ8N3F9 429 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 LINC00471Q8N535 108 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 ZNF433Q8N7K0 673 aaPredicted RBP22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 OR10G2Q8NGC3 310 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 OR6X1Q8NH79 312 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 GTPBP3Q969Y2 492 aaKnown RBP22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 ZC3HAV1LQ96H79 300 aaKnown RBP22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 KATNB1Q9BVA0 655 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 TAS2R16Q9NYV7 291 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 GPR52Q9Y2T5 361 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 ADAM18Q9Y3Q7 739 aa22.34■■□□□ 1.17
TMEM55B-202ENST00000398020 SETXQ7Z333 2677 aaKnown RBP22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 SH3D21A4FU49 640 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 OR6C65A6NJZ3 312 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 ZNF587BE7ETH6 402 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 PCYT1AP49585 367 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 DAP3P51398 398 aaKnown RBP22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 ERVK-25P63136 954 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 C20orf196Q8IYI0 205 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 OR6N1Q8NGY5 312 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 FANK1Q8TC84 345 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 ASB10Q8WXI3 467 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 ADAD1Q96M93 576 aaKnown RBP22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 MED18Q9BUE0 208 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 POLDIP3Q9BY77 421 aaKnown RBP22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 LINC00470Q9BZP3 86 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 TXNIPQ9H3M7 391 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 NTN4Q9HB63 628 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 NDRG3Q9UGV2 375 aa22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 ZNF346Q9UL40 294 aaKnown RBP22.33■■□□□ 1.17
TMEM55B-202ENST00000398020 CIB4A0PJX0 185 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 DEAF1O75398 565 aaPredicted RBP22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 NDUFB2O95178 105 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 ROR2Q01974 943 aaKnown RBP22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 TSPAN31Q12999 210 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 ARMC4Q5T2S8 1044 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 GIPC3Q8TF64 312 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 ZNF566Q969W8 418 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 ZNF837Q96EG3 531 aaPredicted RBP22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 SLC25A44Q96H78 314 aaPredicted RBP22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 TSPAN32Q96QS1 320 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 HDHD5Q9BXW7 423 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 CRLF2Q9HC73 371 aa22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 PDP1Q9P0J1 537 aaPredicted RBP22.33■■□□□ 1.16
TMEM55B-202ENST00000398020 HNRNPRO43390 633 aaKnown RBP22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 PEX19P40855 299 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 STK11Q15831 433 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 ALKBH2Q6NS38 261 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 SMARCD3Q6STE5 483 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 SYT14Q8NB59 555 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 STEAP2Q8NFT2 490 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 LRTOMTQ8WZ04 291 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 FEVQ99581 238 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 GPR35Q9HC97 309 aa22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 MAGED1Q9Y5V3 778 aaPredicted RBP22.32■■□□□ 1.16
TMEM55B-202ENST00000398020 UNC79Q9P2D8 2635 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 PRKACGP22612 351 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 MPGP29372 298 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 CSNK1A1P48729 337 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 ATP6AP1Q15904 470 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 HMBOX1Q6NT76 420 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 ABHD12BQ7Z5M8 362 aaPredicted RBP22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 AMIGO2Q86SJ2 522 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 MARVELD3Q96A59 401 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 NIPSNAP1Q9BPW8 284 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 OR52D1Q9H346 318 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 EGLN3Q9H6Z9 239 aa22.31■■□□□ 1.16
TMEM55B-202ENST00000398020 ENTPD5O75356 428 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 PGA4P0DJD7 388 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 PGA3P0DJD8 388 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 FASP25445 335 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 ACVR1BP36896 505 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 RPL27P61353 136 aaKnown RBP22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 GK3PQ14409 553 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 CEACAM16Q2WEN9 425 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 LRR1Q96L50 414 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 ULBP2Q9BZM5 246 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 NPIPB13A6NJU9 1138 aa22.3■■□□□ 1.16
TMEM55B-202ENST00000398020 NPIPB4C9JG80 1138 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms