RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 KLF13Q9Y2Y9 288 aaPredicted RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 ANKRD12Q6UB98 2062 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 CDHR4A6H8M9 788 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 IDH3GP51553 393 aaPredicted RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 AFMIDQ63HM1 303 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 RTL6Q6ICC9 239 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 BCORP1Q8N888 145 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 HAVCR2Q8TDQ0 301 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 APOC3P02656 99 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 ILKQ13418 452 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 CST9LP1Q5W188 147 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 MFSD12Q6NUT3 480 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 C11orf40Q8WZ69 217 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 NOX3Q9HBY0 568 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 BABAM2Q9NXR7 383 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 IGLV3-10A0A075B6K4 115 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 DNAJB6O75190 326 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 DHRS4L1P0CG22 281 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 ANXA7P20073 488 aaKnown RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 BLVRBP30043 206 aaPredicted RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 TUBB1Q9H4B7 451 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 OR2W5A6NFC9 320 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 A8MVM7 634 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 ZGLP1P0C6A0 271 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 RNF113BQ8IZP6 322 aaKnown RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 FAM185AQ8N0U4 392 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 TMIGD2Q96BF3 282 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 TXLNGYQ9BZA5 131 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 ANKRD19PQ9H560 264 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 FUOMA2VDF0 154 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 TMEM207Q6UWW9 146 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 SYT11Q9BT88 431 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ARNTLO00327 626 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 CAPZBP47756 277 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 CCR5P51681 352 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 NFATC3Q12968 1075 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZNF691Q5VV52 312 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 UBAC2Q8NBM4 344 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 TPPP3Q9BW30 176 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 GALNT9Q9HCQ5 603 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 NOX4Q9NPH5 578 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 PLA2G3Q9NZ20 509 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 GPR171O14626 319 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZNF254O75437 659 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 MEF2DQ14814 521 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 MEP1BQ16820 701 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 EMC7Q9NPA0 242 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ADPRMQ3LIE5 342 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 FAM69AQ5T7M9 428 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZNF511Q8NB15 262 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 PLPP7Q8NBV4 271 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 BEST4Q8NFU0 473 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZMAT3Q9HA38 289 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 WDR37Q9Y2I8 494 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 GIFP27352 417 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ADGRG5Q8IZF4 528 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 OR56B1Q8NGI3 324 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZNF732B4DXR9 585 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 GCAP28676 217 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 MPLP40238 635 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 TAS2R46P59540 309 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 DUSP5Q16690 384 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 C5orf46Q6UWT4 87 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZNF71Q9NQZ8 489 aaPredicted RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 SNRPBP14678 240 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 CATR1Q13166 79 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 C1orf210Q8IVY1 113 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 UBTD2Q8WUN7 234 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 LRRC61Q9BV99 259 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 PLA2G2FQ9BZM2 168 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZNF696Q9H7X3 374 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 FIGNL2A6NMB9 653 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 TMEM212A6NML5 194 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 STMND1H3BQB6 276 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 DEGS1O15121 323 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 BAXQ07812 192 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 H1FNTQ75WM6 255 aaPredicted RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 ANKRD13BQ86YJ7 626 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 MAML2Q8IZL2 1156 aaPredicted RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 CPEB3Q8NE35 698 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 NUDT8Q8WV74 236 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 SEMA4CQ9C0C4 833 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 OR11A1Q9GZK7 315 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 NIPAL2Q9H841 368 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 TNRC6CQ9HCJ0 1690 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 NTNG1Q9Y2I2 539 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 LAMB1P07942 1786 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 IFNA10P01566 189 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 RPL22L1Q6P5R6 122 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 CORO6Q6QEF8 472 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 PIWIL3Q7Z3Z3 882 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 FAM71CQ8NEG0 241 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 OR2I1PQ8NGU4 316 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 C17orf50Q8WW18 174 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 LINC01599Q8WXQ3 324 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 ZDHHC5Q9C0B5 715 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 SGCEO43556 437 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 CLN5O75503 358 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 IL3RAP26951 378 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms