RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ADAM18Q9Y3Q7 739 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 A0A1W2PPW3 197 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 A6NLC8 198 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 NTN3O00634 580 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 HYAL3O43820 417 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 FBXO45P0C2W1 286 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 HIST1H1CP16403 213 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ETV5P41161 510 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 EMX1Q04741 257 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ZFP36L1Q07352 338 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 MYBPHQ13203 477 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 RNASE12Q5GAN4 147 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ACSM5Q6NUN0 579 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 DGAT2L6Q6ZPD8 337 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF511Q8NB15 262 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 FLVCR1-AS1Q8TAF5 88 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 GPR119Q8TDV5 335 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ELP5Q8TE02 316 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 MMP27Q9H306 513 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 VNN3Q9NY84 501 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 GPR160Q9UJ42 338 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 FAM240BA0A1B0GVZ2 78 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 H3BUI4 141 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 TO15178 435 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 WNT11O96014 354 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 NGFRP08138 427 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 DIO1P49895 249 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 SHBQ15464 509 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 CD226Q15762 336 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ASB18Q6ZVZ8 466 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 SLC16A9Q7RTY1 509 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM99Q8N816 258 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 KTI12Q96EK9 354 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF285Q96NJ3 590 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 TEAD3Q99594 435 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 URM1Q9BTM9 101 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 NTN4Q9HB63 628 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 PAK1IP1Q9NWT1 392 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 DTX4Q9Y2E6 619 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 LRRN3E7EW58 273 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 IMPA2O14732 288 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 CFL1P23528 166 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 PSMB10P40306 273 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 FOXL2P58012 376 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 TSPAN5P62079 268 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 CEBPEQ15744 281 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 GFRALQ6UXV0 394 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 LSMEM1Q8N8F7 131 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 NAXEQ8NCW5 288 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 BARD1Q99728 777 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 SLC52A3Q9NQ40 469 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 UBAP1Q9NZ09 502 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 COA3Q9Y2R0 106 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 GVINP1Q7Z2Y8 2422 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 GATBO75879 557 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 QDPRP09417 244 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 RAB3BP20337 219 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ZFP36L2P47974 494 aaKnown RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 ISL1P61371 349 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 CXADRP78310 365 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 PLET1Q6UQ28 207 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 B3GLCTQ6Y288 498 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-204ENST00000397606 CTHRC1Q96CG8 243 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 LMF1Q96S06 567 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 MALT1Q9UDY8 824 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 GLS2Q9UI32 602 aa7.5□□□□□ -1.21
PTPRD-204ENST00000397606 SPTBP11277 2137 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 PRSS37A4D1T9 235 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 OR8G3PP0DMU2 310 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF182P17025 639 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MAKP20794 623 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MSR1P21757 451 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 PAX7P23759 505 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 OR3A3P47888 321 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 OR3A2P47893 321 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 NTRK2Q16620 822 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ACOT12Q8WYK0 555 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MBOAT4Q96T53 435 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 HINT3Q9NQE9 182 aaKnown RBP7.49□□□□□ -1.21
PTPRD-204ENST00000397606 IL20Q9NYY1 176 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 FOXJ2Q9P0K8 574 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 PROCRQ9UNN8 238 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ANKRD30BLA7E2S9 258 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SLC19A2O60779 497 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 CLPXO76031 633 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 NUP62P37198 522 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-204ENST00000397606 GZMMP51124 257 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 TGIF1Q15583 401 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 BORAQ6PGQ7 559 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM205Q6UW68 189 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ZAR1Q86SH2 424 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 OR5D14Q8NGL3 314 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MED29Q9NX70 200 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 NTMQ9P121 344 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 ARHGEF17Q96PE2 2063 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-204ENST00000397606 SHISA8B8ZZ34 492 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 MAS1P04201 325 aa7.49□□□□□ -1.21
PTPRD-204ENST00000397606 IGFBP1P08833 259 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms