RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ELOA3BQ3SY89 546 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 TMEM201Q5SNT2 666 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 ADAM5Q6NVV9 412 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 PODNL1Q6PEZ8 512 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 TTC33Q6PID6 262 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 TBPL2Q6SJ96 375 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 IZUMO2Q6UXV1 221 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 MBOAT2Q6ZWT7 520 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 FCRLAQ7L513 359 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 GRINAQ7Z429 371 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 TSPYL5Q86VY4 417 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 CDK20Q8IZL9 346 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 RNF113BQ8IZP6 322 aaKnown RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 HS3ST5Q8IZT8 346 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 STEAP2Q8NFT2 490 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 ELOA3Q8NG57 546 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 OR4K5Q8NGD3 323 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 PIGXQ8TBF5 258 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 SLC7A13Q8TCU3 470 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 SMAP2Q8WU79 429 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 TMEM239Q8WW34 195 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 DNAJC9Q8WXX5 260 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 FEVQ99581 238 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 OR10A4Q9H209 315 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 CXorf56Q9H5V9 222 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 MAN2C1Q9NTJ4 1040 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 USE1Q9NZ43 259 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 ENOPH1Q9UHY7 261 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 GDF2Q9UK05 429 aaPredicted RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 MGAT4BQ9UQ53 548 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 MED31Q9Y3C7 131 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 RNF115Q9Y4L5 304 aa9.12□□□□□ -0.95
NEDD8-202ENST00000396828 CHD3Q12873 2000 aaKnown RBP9.12□□□□□ -0.95
NEDD8-202ENST00000396828 A0A087WUJ7 227 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SMAD9O15198 467 aaKnown RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 CRLF1O75462 422 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 LYZL6O75951 148 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 CD8AP01732 235 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 IGHV4-39P01824 125 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 THY1P04216 161 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 ALPLP05186 524 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 YES1P07947 543 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF26P17031 533 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 PRKACGP22612 351 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 IGFBP5P24593 272 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 ELK4P28324 431 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 ADH6P28332 368 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 TACR3P29371 465 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 ACVR1BP36896 505 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 APOBEC1P41238 236 aaKnown RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 EIF1P41567 113 aaKnown RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 POLR2HP52434 150 aaKnown RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 UGT2B15P54855 530 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 RPS4XP62701 263 aaKnown RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 IL1RL1Q01638 556 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 FAPQ12884 760 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 RNPS1Q15287 305 aaKnown RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SEC23BQ15437 767 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 RFX4Q33E94 735 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 PDSS1Q5T2R2 415 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 FAHD1Q6P587 224 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 DNM1P46Q6ZS02 220 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 NKAIN4Q8IVV8 208 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 AQP11Q8NBQ7 271 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 TMEM255BQ8WV15 326 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 CPNE4Q96A23 557 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 C3orf49Q96BT1 292 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 DNAJA3Q96EY1 480 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 MRGPRX4Q96LA9 322 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 RDH12Q96NR8 316 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF184Q99676 751 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SLC29A1Q99808 456 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 PRSS27Q9BQR3 290 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 FUZQ9BT04 418 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SLC19A3Q9BZV2 496 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 ADAM19Q9H013 955 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SLCO5A1Q9H2Y9 848 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SMURF2Q9HAU4 748 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SERINC1Q9NRX5 453 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 KRT84Q9NSB2 600 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 SMPD3Q9NY59 655 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-202ENST00000396828 NPAP1Q9NZP6 1156 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 TMEM5Q9Y2B1 443 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 POFUT2Q9Y2G5 429 aa9.11□□□□□ -0.95
NEDD8-202ENST00000396828 A0A087WUU8 490 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 HTR3EA5X5Y0 456 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 LYPD3O95274 346 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 GASTP01350 101 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 CD3EP07766 207 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 GSTM3P21266 225 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 FUT4P22083 530 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 IL32P24001 234 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 NTF4P34130 210 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 OR3A2P47893 321 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 DAPP51397 102 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 MAP2K6P52564 334 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 AQP4P55087 323 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 MERTKQ12866 999 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 ITGADQ13349 1161 aa9.1□□□□□ -0.95
NEDD8-202ENST00000396828 ZNF672Q499Z4 452 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms