RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZNF660Q6AZW8 331 aaPredicted RBP12.14□□□□□ -0.47
TRIM40-207ENST00000396581 FCRL6Q6DN72 434 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 KIRREL2Q6UWL6 708 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF550Q7Z398 422 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 CDH26Q8IXH8 852 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF595Q8IYB9 648 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 EXD3Q8N9H8 876 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 CAMKVQ8NCB2 501 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 OR5M1Q8NGP8 315 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 COQ8AQ8NI60 647 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 HLA-CQ95604 372 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 APOOQ9BUR5 198 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 SLITRK2Q9H156 845 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 TSPAN10Q9H1Z9 355 aaPredicted RBP12.14□□□□□ -0.47
TRIM40-207ENST00000396581 TCF7L1Q9HCS4 588 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 TBC1D29Q9UFV1 150 aa12.14□□□□□ -0.47
TRIM40-207ENST00000396581 TRBV5-7A0A0A0MS05 114 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 TCRBV21S2A2A0A5A6 115 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 C10orf142B7Z368 130 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 F5H5P2 479 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 NPIPB9F8W1W9 429 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 NDUFA2O43678 99 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 RBBP9O75884 186 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 EML2O95834 649 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 HPP00738 406 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 RPA2P15927 270 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 OR7E24Q6IFN5 339 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 SHISA5Q8N114 240 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 STPG2Q8N412 459 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 OR4C16Q8NGL9 310 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 ARL6Q9H0F7 186 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 ALX4Q9H161 411 aaPredicted RBP12.13□□□□□ -0.47
TRIM40-207ENST00000396581 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.13□□□□□ -0.47
TRIM40-207ENST00000396581 FRRS1LQ9P0K9 344 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF337Q9Y3M9 751 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 SCN3AQ9NY46 2000 aa12.13□□□□□ -0.47
TRIM40-207ENST00000396581 FOXS1O43638 330 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 IGF2P01344 180 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 IGKV1D-16P01601 117 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 CSF1P09603 554 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 TACSTD2P09758 323 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 TMIGD3P0DMS9 266 aaPredicted RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 ICAM2P13598 275 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 MPGP29372 298 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 CSF2RBP32927 897 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 LTBQ06643 244 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 SLC16A9Q7RTY1 509 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 PDZD9Q8IXQ8 264 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 OR6K6Q8NGW6 343 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 CCDC74AQ96AQ1 378 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 PELOQ9BRX2 385 aaKnown RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 ALG12Q9BV10 488 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 FGF22Q9HCT0 170 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 PCOLCE2Q9UKZ9 415 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 A0A087WV48 116 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 POM121BA6NF01 834 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 EFCAB7A8K855 629 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 D6RAR5 112 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF432O94892 652 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 APEHP13798 732 aaKnown RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 S1PR1P21453 382 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 ITPKBP27987 946 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 CD96P40200 585 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 PRPS1P60891 318 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 SSBP1Q04837 148 aaKnown RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 PCGF3Q3KNV8 242 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 ANKRD16Q6P6B7 361 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 OR52R1Q8NGF1 315 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 OR5AK2Q8NH90 309 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 ANKRD9Q96BM1 317 aaPredicted RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 OR2M4Q96R27 311 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 GINS4Q9BRT9 223 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 SLC19A3Q9BZV2 496 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 MS4A7Q9GZW8 240 aaPredicted RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 DNTTIP1Q9H147 329 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 RXFP3Q9NSD7 469 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 STEAP1Q9UHE8 339 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 MRM2Q9UI43 246 aaKnown RBP12.12□□□□□ -0.47
TRIM40-207ENST00000396581 MOKQ9UQ07 419 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 SPACA6W5XKT8 324 aa12.12□□□□□ -0.47
TRIM40-207ENST00000396581 NUP210LQ5VU65 1888 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 ARPC4-TTLL3A0A0A6YYG9 625 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 TMEM272A0A1B0GTI8 110 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF860A6NHJ4 632 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 LGALS8O00214 317 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 SDC3O75056 442 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF254O75437 659 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 IGLV3-19P01714 112 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF35P13682 527 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 RPL4P36578 427 aaKnown RBP12.11□□□□□ -0.47
TRIM40-207ENST00000396581 GMFBP60983 142 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 NDUFAF6Q330K2 333 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 MANEAQ5SRI9 462 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 DCAF12L2Q5VW00 463 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 FIGLAQ6QHK4 219 aa12.11□□□□□ -0.47
TRIM40-207ENST00000396581 PRSS41Q7RTY9 318 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms