RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CD37P11049 281 aa13.91□□□□□ -0.18
CPSF7-202ENST00000394888 NTRK2Q16620 822 aa13.91□□□□□ -0.18
CPSF7-202ENST00000394888 ZNF57Q68EA5 555 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-202ENST00000394888 ADGRG3Q86Y34 549 aa13.91□□□□□ -0.18
CPSF7-202ENST00000394888 SNX33Q8WV41 574 aa13.91□□□□□ -0.18
CPSF7-202ENST00000394888 OR8D2Q9GZM6 311 aa13.91□□□□□ -0.18
CPSF7-202ENST00000394888 BRD7Q9NPI1 651 aa13.91□□□□□ -0.18
CPSF7-202ENST00000394888 ANKRD34BA5PLL1 514 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 TVP23AA6NH52 213 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 PNPP00491 289 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 ELAVL1Q15717 326 aaKnown RBP13.9□□□□□ -0.18
CPSF7-202ENST00000394888 HACD4Q5VWC8 232 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 C16orf47Q6ZP98 133 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-202ENST00000394888 C7orf57Q8NEG2 295 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 PELOQ9BRX2 385 aaKnown RBP13.9□□□□□ -0.18
CPSF7-202ENST00000394888 PHF7Q9BWX1 381 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-202ENST00000394888 SLA2Q9H6Q3 261 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 RXFP3Q9NSD7 469 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 KIAA1549Q9HCM3 1950 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 SERPINA3P01011 423 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 MT-ND4P03905 459 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 SMAD4Q13485 552 aaKnown RBP13.9□□□□□ -0.18
CPSF7-202ENST00000394888 HSD17B12Q53GQ0 312 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 DNAAF1Q8NEP3 725 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 CCDC74AQ96AQ1 378 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.9□□□□□ -0.18
CPSF7-202ENST00000394888 LIN7BQ9HAP6 207 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 DDX28Q9NUL7 540 aaKnown RBP13.9□□□□□ -0.18
CPSF7-202ENST00000394888 SOHLH2Q9NX45 425 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 CTSFQ9UBX1 484 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 SLC6A5Q9Y345 797 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 SEC16AO15027 2179 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 CELSR3Q9NYQ7 3312 aa13.9□□□□□ -0.18
CPSF7-202ENST00000394888 ZNF593O00488 134 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-202ENST00000394888 IGHMP01871 453 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 HPXP02790 462 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 GIFP27352 417 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 GPLD1P80108 840 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 TDGQ13569 410 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 RNASE12Q5GAN4 147 aaKnown RBP13.89□□□□□ -0.19
CPSF7-202ENST00000394888 EMC4Q5J8M3 183 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 FAM205BPQ63HN1 556 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 FAM166AQ6J272 317 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 PM20D2Q8IYS1 436 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 NFAM1Q8NET5 270 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-202ENST00000394888 MOKQ9UQ07 419 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 TRABD2BA6NFA1 517 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 OR2B3O76000 313 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 DXOO77932 396 aaKnown RBP13.89□□□□□ -0.19
CPSF7-202ENST00000394888 TIAF1O95411 115 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 CSNK1EP49674 416 aaKnown RBP13.89□□□□□ -0.19
CPSF7-202ENST00000394888 HSD11B2P80365 405 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 ALKBH1Q13686 389 aaKnown RBP13.89□□□□□ -0.19
CPSF7-202ENST00000394888 ETFDHQ16134 617 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 C6orf183Q5T699 404 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 APCDD1LQ8NCL9 501 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 PHYHIPQ92561 330 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 AKAP1Q92667 903 aaKnown RBP eCLIP13.89□□□□□ -0.196e-6■■□□□ 12.3
CPSF7-202ENST00000394888 PPP1R14AQ96A00 147 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 CLIP3Q96DZ5 547 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 MVB12AQ96EY5 273 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 HDHD2Q9H0R4 259 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 NPTNQ9Y639 398 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 ZNF254O75437 659 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 PRKCAP17252 672 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 BIKQ13323 160 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 FDX2Q6P4F2 183 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 LYPD6Q86Y78 171 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 OR1N1Q8NGS0 311 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 SYT4Q9H2B2 425 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 KCNG2Q9UJ96 466 aa13.89□□□□□ -0.19
CPSF7-202ENST00000394888 TRAV6A0A075B6T7 132 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 SCDO00767 359 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 GMFGO60234 142 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 DLX5P56178 289 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 TEX30Q5JUR7 227 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 BPHLQ86WA6 291 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-202ENST00000394888 OR2G2Q8NGZ5 317 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 GPR119Q8TDV5 335 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 K7ESF4 209 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 ARL6IP5O75915 188 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 HLA-DOBP13765 273 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 MNDAP41218 407 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 DNASE2BQ8WZ79 361 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 GPR137Q96N19 417 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 SEMA4CQ9C0C4 833 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 SRA1Q9HD15 236 aaKnown RBP13.88□□□□□ -0.19
CPSF7-202ENST00000394888 VSX1Q9NZR4 365 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-202ENST00000394888 KLK11Q9UBX7 282 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 NUDT21O43809 227 aaKnown RBP13.88□□□□□ -0.19
CPSF7-202ENST00000394888 SULT1A3P0DMM9 295 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 SULT1A4P0DMN0 295 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 GDNFP39905 211 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 ZNF527Q8NB42 609 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 OR52I2Q8NH67 350 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 OMA1Q96E52 524 aa13.88□□□□□ -0.19
CPSF7-202ENST00000394888 ZNF275Q9NSD4 429 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-202ENST00000394888 PCSK5Q92824 1860 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 CIB4A0PJX0 185 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 FABP7O15540 132 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms