RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ERV3-1Q14264 604 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 LTB4RQ15722 352 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 COX20Q5RI15 118 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 LAMTOR1Q6IAA8 161 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 OR10K2Q6IF99 312 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 PRSS45Q7RTY3 260 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 LINC01555Q8NAE3 123 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 OR52R1Q8NGF1 315 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 OR5L2Q8NGL0 311 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 OR14A16Q8NHC5 309 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 BRIX1Q8TDN6 353 aaKnown RBP5.24□□□□□ -1.57
RFFL-202ENST00000394597 DUSP19Q8WTR2 217 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 SLC38A5Q8WUX1 472 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 CDS1Q92903 461 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 NKD1Q969G9 470 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 SCMH1Q96GD3 660 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 ZC3HAV1LQ96H79 300 aaKnown RBP5.24□□□□□ -1.57
RFFL-202ENST00000394597 HS6ST2Q96MM7 605 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 ELF4Q99607 663 aaPredicted RBP5.24□□□□□ -1.57
RFFL-202ENST00000394597 VRK1Q99986 396 aaPredicted RBP5.24□□□□□ -1.57
RFFL-202ENST00000394597 LRRC61Q9BV99 259 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 KCNJ16Q9NPI9 418 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 GSN-AS1Q9NRJ2 163 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 GSKIPQ9P0R6 139 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 ABI3Q9P2A4 366 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 NCDNQ9UBB6 729 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 GHRLQ9UBU3 117 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 DAPP1Q9UN19 280 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 POLR1DQ9Y2S0 133 aa5.24□□□□□ -1.57
RFFL-202ENST00000394597 A0A1B0GV50 99 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PEX12O00623 359 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 CTNSO60931 367 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 CRTAPO75718 401 aaPredicted RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 EIF3GO75821 320 aaKnown RBP eCLIP5.23□□□□□ -1.57
RFFL-202ENST00000394597 LGI1O95970 557 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ST6GAL1P15907 406 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ANXA7P20073 488 aaKnown RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 CNR1P21554 472 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ACHEP22303 614 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ADH6P28332 368 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SLC6A1P30531 599 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ADH7P40394 386 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PTGFRP43088 359 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 OR1D4P47884 311 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 OR12D2P58182 307 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 DGCR2P98153 550 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PLCXD2Q0VAA5 305 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF385BQ569K4 471 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SFXN4Q6P4A7 337 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 FAHD1Q6P587 224 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SKA3Q8IX90 412 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF440Q8IYI8 595 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF619Q8N2I2 560 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 OR4F15Q8NGB8 312 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 OR52I1Q8NGK6 324 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 TERB2Q8NHR7 220 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 DCUN1D4Q92564 292 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 C16orf58Q96GQ5 468 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 LPAR4Q99677 370 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 DEFB126Q9BYW3 111 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ENKD1Q9H0I2 346 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF700Q9H0M5 742 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 CST11Q9H112 138 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PRO1933Q9H354 126 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SERINC1Q9NRX5 453 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SIRT5Q9NXA8 310 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 GAR1Q9NY12 217 aaKnown RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 A0A1B0GV90 55 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 FAM227AF5H4B4 570 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 M0R3H8 397 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF593O00488 134 aaPredicted RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 IMPA2O14732 288 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 NDUFS6O75380 124 aaKnown RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 NMBP08949 121 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SLC35E2P0CK97 266 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PIPP12273 146 aaPredicted RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 IFNGR1P15260 489 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PTNP21246 168 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 CRYBB2P43320 205 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 GIPRP48546 466 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 EMP2P54851 167 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 MAT1AQ00266 395 aaKnown RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 FABP5Q01469 135 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PIN1Q13526 163 aaPredicted RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 EXOSC7Q15024 291 aaKnown RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 GLYR1Q49A26 553 aaPredicted RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 OR2B11Q5JQS5 317 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 CYB5R2Q6BCY4 276 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 HEPHL1Q6MZM0 1159 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF585AQ6P3V2 769 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 FAM111BQ6SJ93 734 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 GALNTL5Q7Z4T8 443 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 TMEM156Q8N614 296 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 RNF141Q8WVD5 230 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 TMEM41AQ96HV5 264 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SDHCQ99643 169 aaPredicted RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF559Q9BR84 538 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SHARPINQ9H0F6 387 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 MIXL1Q9H2W2 232 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 FGF21Q9NSA1 209 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms