RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 THAP7Q9BT49 309 aaPredicted RBP8.8□□□□□ -1
COL6A3-204ENST00000392003 LRRN3Q9H3W5 708 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 B3GAT2Q9NPZ5 323 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 ZMIZ1Q9ULJ6 1067 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 HSPB11Q9Y547 144 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 REV3LO60673 3130 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 TRABD2BA6NFA1 517 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 ZNF879B4DU55 563 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 ARPC3O15145 178 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 BCAT2O15382 392 aaPredicted RBP8.8□□□□□ -1
COL6A3-204ENST00000392003 NPR2P20594 1047 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 RORAP35398 523 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 OR10A3P58181 314 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 PITPNAQ00169 270 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 SLITRK4Q8IW52 837 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 TEX19Q8NA77 164 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 CADM4Q8NFZ8 388 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 C3orf49Q96BT1 292 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 OR8D2Q9GZM6 311 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 NANSQ9NR45 359 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 ING3Q9NXR8 418 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 SIT1Q9Y3P8 196 aa8.8□□□□□ -1
COL6A3-204ENST00000392003 A0A1W2PPK0 400 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 GATBO75879 557 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 GALNSP34059 522 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 GNG10P50151 68 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 GFERP55789 205 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 RAB25P57735 213 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 CDK5R1Q15078 307 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 AKIRIN2Q53H80 203 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 LEG1Q6P5S2 330 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 SSX6Q7RTT6 188 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 FAM220AQ7Z4H9 259 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 SMIM19Q96E16 107 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ABRACLQ9P1F3 81 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 TRAV1-2A0A0B4J238 106 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 LMO7DNF2Z398 122 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 OGG1O15527 345 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 EEF1E1O43324 174 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 GPRIN2O60269 458 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 SLC43A1O75387 559 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 EIF4EP06730 217 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 SPI1P17947 270 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ARRB1P49407 418 aaPredicted RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 CLDN20P56880 219 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 GXYLT1Q4G148 440 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 HSD17B12Q53GQ0 312 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 HACD4Q5VWC8 232 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 RBMS3Q6XE24 437 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 TTLL10Q6ZVT0 673 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 GPAT4Q86UL3 456 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ZNF615Q8N8J6 731 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 OR14A16Q8NHC5 309 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ZFAND1Q8TCF1 268 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 PELI1Q96FA3 418 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 SLC46A1Q96NT5 459 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 SPRTNQ9H040 489 aaPredicted RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 ABCG5Q9H222 651 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 NIT2Q9NQR4 276 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 B3GNT2Q9NY97 397 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 NCDNQ9UBB6 729 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 SLC6A5Q9Y345 797 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 MMACHCQ9Y4U1 282 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ALG5Q9Y673 324 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 A0A0A6YYJ9 748 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 A0A1B0GVT2 93 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 PDCD5O14737 125 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 FZD7O75084 574 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 OR2B3O76000 313 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 DHFRP00374 187 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 TFP02787 698 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 TACSTD2P09758 323 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 PPICP45877 212 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 AFF3P51826 1226 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 GGTLC2Q14390 218 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ZNF169Q14929 603 aaPredicted RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 ISXQ2M1V0 245 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 HFEQ30201 348 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 LAMTOR1Q6IAA8 161 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ATRAIDQ6UW56 229 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 PXKQ7Z7A4 578 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 OR6M1Q8NGM8 313 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 OR13C5Q8NGS8 318 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 RASD2Q96D21 266 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 PGLYRP3Q96LB9 341 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 GAL3ST4Q96RP7 486 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 GFM1Q96RP9 751 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 GTPBP2Q9BX10 602 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 PPIL3Q9H2H8 161 aaKnown RBP8.79□□□□□ -1
COL6A3-204ENST00000392003 NRIP3Q9NQ35 241 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 CUTCQ9NTM9 273 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 CTSFQ9UBX1 484 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 ST6GALNAC2Q9UJ37 374 aa8.79□□□□□ -1
COL6A3-204ENST00000392003 IGHV5-51A0A0C4DH38 117 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 A0A1B0GVC2 190 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 A6NIN4 97 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 C10orf142B7Z368 130 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 MAGEB4O15481 346 aaPredicted RBP8.78□□□□□ -1
COL6A3-204ENST00000392003 ZNF264O43296 627 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms