RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 ZNF660Q6AZW8 331 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 RPUSD3Q6P087 351 aaKnown RBP-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 MED27Q6P2C8 311 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ABHD13Q7L211 337 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 PRSS42Q7Z5A4 293 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CDKL3Q8IVW4 592 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 WDFY1Q8IWB7 410 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CLYBLQ8N0X4 340 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 TMEM256Q8N2U0 113 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 OR4K14Q8NGD5 310 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 FGF11Q92914 225 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CMTM7Q96FZ5 175 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SEC22AQ96IW7 307 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ZNF488Q96MN9 340 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 WRAP53Q9BUR4 548 aaKnown RBP-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 TMEM59Q9BXS4 323 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 MRPL32Q9BYC8 188 aaKnown RBP-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 TXLNGYQ9BZA5 131 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 OR52D1Q9H346 318 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 RNF167Q9H6Y7 350 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 C1orf123Q9NWV4 160 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 FAM206AQ9NX38 181 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 C21orf62Q9NYP8 219 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SPATA7Q9P0W8 599 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 STAP1Q9ULZ2 295 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 FRAS1Q86XX4 4008 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ADGRB3O60242 1522 aa-0.69□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CCDC7Q96M83 1385 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 PCLOQ9Y6V0 5065 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 IGHV1-3A0A0C4DH29 117 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SIGLEC16A6NMB1 481 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 HIP1O00291 1037 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SYNGR2O43760 224 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SCELO95171 688 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CDS2O95674 445 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 GAPDHP04406 335 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 LGALS2P05162 132 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 FABP3P05413 133 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SLC35G6P0C7Q6 338 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 UBTFL6P0CB48 400 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ZNF18P17022 549 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 VCLP18206 1134 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 NTF3P20783 257 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 AQP2P41181 271 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CDKN2BP42772 138 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CCL23P55773 120 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 KLF3P57682 345 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 OSTNP61366 133 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 RPS21P63220 83 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 IL5RAQ01344 420 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 TSPY1Q01534 308 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 PON3Q15166 354 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SP6Q3SY56 376 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 RNASE13Q5GAN3 156 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 TEX30Q5JUR7 227 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 C1orf141Q5JVX7 400 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CCDC158Q5M9N0 1113 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 HECTD3Q5T447 861 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 BEND3Q5T5X7 828 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 CAVIN1Q6NZI2 390 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 PRSS54Q6PEW0 395 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 SNX20Q7Z614 316 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 RABEPKQ7Z6M1 372 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ZNF546Q86UE3 836 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 EGFL6Q8IUX8 553 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 UNC45BQ8IWX7 931 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ZADH2Q8N4Q0 377 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 LRRC17Q8N6Y2 441 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 OR6N1Q8NGY5 312 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 OR4S2Q8NH73 311 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 C12orf42Q96LP6 360 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 RUFY1Q96T51 708 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 NUDT16L1Q9BRJ7 211 aaKnown RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ACTR6Q9GZN1 396 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ABCG4Q9H172 646 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 RPAP3Q9H6T3 665 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 LINC00574Q9H8X3 128 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 AATFQ9NY61 560 aaKnown RBP eCLIP-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 KCNIP1Q9NZI2 227 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 BCAP29Q9UHQ4 241 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 MAD2L2Q9UI95 211 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 FOXJ3Q9UPW0 622 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 DLG5Q8TDM6 1919 aa-0.7□□□□□ -2.52
RNU6-1239P-201ENST00000391310 NEBP20929 6669 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 KMT2CQ8NEZ4 4911 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 IGKV1-9A0A0C4DH69 117 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 A0A1B0GUS0 222 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 GOLGA6L4A6NEF3 574 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 LOC110117498-PIK3R3F6TDL0 507 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 LY6LH3BQJ8 138 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 ZSCAN12O43309 604 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 IGLV3-25P01717 112 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 MMP7P09237 267 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 OR8U9P0C7N5 309 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 GZMHP20718 246 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 FGF9P31371 208 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 YWHABP31946 246 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 MAGEA3P43357 314 aa-0.71□□□□□ -2.52
RNU6-1239P-201ENST00000391310 PRLHRP49683 370 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms