RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SDHAF3Q9NRP4 125 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR5H14A6NHG9 310 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 WDPCPO95876 746 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 GUCA2AQ02747 115 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 PDZK1IP1Q13113 114 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 CST9Q5W186 159 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 CD300LDQ6UXZ3 194 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 GLDNQ6ZMI3 551 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 TMEM91Q6ZNR0 172 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 PIGMQ9H3S5 423 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 MIA3Q5JRA6 1907 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 GLCEO94923 617 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 BLKP51451 505 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 GLO1Q04760 184 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 KIR2DS3Q14952 304 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF679Q8IYX0 411 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 CLRN3Q8NCR9 226 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 HAVCR2Q8TDQ0 301 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 TTC9Q92623 222 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 GIMAP5Q96F15 307 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SELENOIQ9C0D9 397 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF850A8MQ14 1090 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SNRPGP15A8MWD9 76 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 PCBP4P57723 403 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SGCAQ16586 387 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ARHGAP11BQ3KRB8 267 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 TMEM225Q6GV28 225 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 MORN4Q8NDC4 146 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 TMED6Q8WW62 240 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC41A2Q96JW4 573 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC6A18Q96N87 628 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 FAM83CQ9BQN1 747 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 WFDC6Q9BQY6 131 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 SULT4A1Q9BR01 284 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 C2orf42Q9NWW7 574 aa12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 APOBEC3BQ9UH17 382 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-201ENST00000389328 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 COL11A1P12107 1806 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 PLPP2O43688 288 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 CD14P08571 375 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 DIO1P49895 249 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 CLDN6P56747 220 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 DUSP8Q13202 625 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 GPM6BQ13491 265 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 RBM39Q14498 530 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 STAC2Q6ZMT1 411 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR2A1Q8NGT9 310 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 RNF141Q8WVD5 230 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 PELI1Q96FA3 418 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC25A21Q9BQT8 299 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 KCNJ16Q9NPI9 418 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 SERINC1Q9NRX5 453 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 CTNSO60931 367 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 CALCBP10092 127 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 MAOBP27338 520 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 CAPZA1P52907 286 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 EMP2P54851 167 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 EBPQ15125 230 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC22A6Q4U2R8 563 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 PLA1AQ53H76 456 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF770Q6IQ21 691 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF704Q6ZNC4 412 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 SYS1Q8N2H4 156 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 NIT2Q9NQR4 276 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 TRAV1-2A0A0B4J238 106 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 IDSB3KWA1 339 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 NPIPB8E9PQR5 432 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 KLF8O95600 359 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 APBB3O95704 486 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 TUBG1P23258 451 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 PXNP49023 591 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 NR0B1P51843 470 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 CLRN1P58418 232 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 MAT1AQ00266 395 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 WBP2NLQ6ICG8 309 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR10K2Q6IF99 312 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 SCMH1Q96GD3 660 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 UQCC2Q9BRT2 126 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 WDR76Q9H967 626 aa12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF629Q9UEG4 869 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-201ENST00000389328 C17orf105B2RV13 164 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 HNRNPA1P09651 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 BDKRB2P30411 391 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 CCINQ13939 588 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 ADAMTSL4Q6UY14 1074 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 LRRC69Q6ZNQ3 347 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 C12orf40Q86WS4 652 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 LMF2Q9BU23 707 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 RHBDD3Q9Y3P4 386 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 WNK3Q9BYP7 1800 aa12.05□□□□□ -0.48
TRAPPC9-201ENST00000389328 LOC100289279A0A1B0GTE1 492 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms