RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 Q96M85 177 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 WDR77Q9BQA1 342 aaPredicted RBP13.67□□□□□ -0.22
CTNS-202ENST00000381870 NRIP2Q9BQI9 281 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 RCC2Q9P258 522 aaKnown RBP13.67□□□□□ -0.22
CTNS-202ENST00000381870 PRRC2BQ5JSZ5 2229 aaKnown RBP13.67□□□□□ -0.22
CTNS-202ENST00000381870 TRAV8-7A0A075B6U6 113 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 A0A1B0GVT2 93 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 GXYLT2A0PJZ3 443 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 CLN5O75503 358 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 IFNGP01579 166 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 SELLP14151 372 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 F2RL1P55085 397 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 CAP1Q01518 475 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 FIP1L1Q6UN15 594 aaKnown RBP13.67□□□□□ -0.22
CTNS-202ENST00000381870 SLC29A4Q7RTT9 530 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 GABRG1Q8N1C3 465 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 PCSK9Q8NBP7 692 aaKnown RBP13.67□□□□□ -0.22
CTNS-202ENST00000381870 OR51D1Q8NGF3 324 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 TMED6Q8WW62 240 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 TMEM27Q9HBJ8 222 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 MMP26Q9NRE1 261 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 MED31Q9Y3C7 131 aa13.67□□□□□ -0.22
CTNS-202ENST00000381870 CKBP12277 381 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 MUC1P15941 1255 aaPredicted RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 CSRP1P21291 193 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 CTGFP29279 349 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 ELAVL2Q12926 359 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 TGIF1Q15583 401 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 MST1LQ2TV78 715 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 ATPAF1Q5TC12 328 aaPredicted RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 ANKRD16Q6P6B7 361 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 DCUN1D3Q8IWE4 304 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 GALNT16Q8N428 558 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 POMGNT2Q8NAT1 580 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 INO80EQ8NBZ0 244 aaPredicted RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 HIST1H2BAQ96A08 127 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 HSPA12BQ96MM6 686 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 MYADMQ96S97 322 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 NKX3-1Q99801 234 aaPredicted RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 RSRP1Q9BUV0 290 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 SELENOIQ9C0D9 397 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 LAT2Q9GZY6 243 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 TMEM100Q9NV29 134 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 CES1P1Q9UKY3 287 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 A0A1B0GTH9 108 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 POM121BA6NF01 834 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 FAM171A2A8MVW0 826 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 GRM6O15303 877 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 ERI3O43414 337 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 KLK3P07288 261 aaPredicted RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTNS-202ENST00000381870 PRSS3P35030 304 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 PSMD4P55036 377 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 CSNK1G2P78368 415 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 SRSF4Q08170 494 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 FHL1Q13642 323 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 ELAVL1Q15717 326 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 OR2B11Q5JQS5 317 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 ARHGAP11AQ6P4F7 1023 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 TMEM200AQ86VY9 491 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 PARGQ86W56 976 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 ACOT4Q8N9L9 421 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 OR6K6Q8NGW6 343 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 EDAQ92838 391 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 MRPL38Q96DV4 380 aaKnown RBP13.66□□□□□ -0.22
CTNS-202ENST00000381870 PIK3IP1Q96FE7 263 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 EGLN1Q9GZT9 426 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 OR52A5Q9H2C5 316 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 EPHX3Q9H6B9 360 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 SAGE1Q9NXZ1 904 aa13.66□□□□□ -0.22
CTNS-202ENST00000381870 HEATR5BQ9P2D3 2071 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 A0A1W2PPV9 198 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 ADAMTS4O75173 837 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 RDH16O75452 317 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 HLA-AP01891 365 aaKnown RBP13.65□□□□□ -0.22
CTNS-202ENST00000381870 CD74P04233 296 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 PGAM2P15259 253 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 AK4P27144 223 aaPredicted RBP13.65□□□□□ -0.22
CTNS-202ENST00000381870 CERS1P27544 350 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 TM4SF4P48230 202 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 ACTR1AP61163 376 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 CXADRP78310 365 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 PJVKQ0ZLH3 352 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 NOGQ13253 232 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 GGTLC2Q14390 218 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 Q499Y3 187 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 NKAPLQ5M9Q1 402 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 SLC48A1Q6P1K1 146 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 SLC35F3Q8IY50 421 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 OR7G2Q8NG99 324 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 STOML3Q8TAV4 291 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 NUBPLQ8TB37 319 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 ZPLD1Q8TCW7 415 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 RPS4Y2Q8TD47 263 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 RNF141Q8WVD5 230 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 TFGQ92734 400 aaPredicted RBP13.65□□□□□ -0.22
CTNS-202ENST00000381870 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
CTNS-202ENST00000381870 HRH4Q9H3N8 390 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms