RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 POFUT2Q9Y2G5 429 aa11.27□□□□□ -0.61
RPAIN-202ENST00000381208 IGHV2OR16-5A0A0B4J2B6 119 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 SLC35F4A4IF30 521 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 MS4A18H0YCH9 400 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 M0R3G1 203 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 LMX1BO60663 402 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 OR6A2O95222 327 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 IGHV4-31P0DP07 118 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 AQP1P29972 269 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 CALCRP30988 508 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 EVX1P49640 407 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 CDH12P55289 794 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 TUBA1BP68363 451 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 TUBA4AP68366 448 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 NPRL3Q12980 569 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 MS4A18Q3C1V0 323 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 METTL21CQ5VZV1 264 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 FAM166AQ6J272 317 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 UGT2A3Q6UWM9 527 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 TUBA1AQ71U36 451 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 C10orf111Q8N326 155 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 C10orf53Q8N6V4 93 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 OR6N1Q8NGY5 312 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 OR5J2Q8NH18 312 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 MPP4Q96JB8 637 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 MAGEB18Q96M61 343 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 MCHR1Q99705 422 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 ULBP2Q9BZM5 246 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 SHARPINQ9H0F6 387 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 IKZF5Q9H5V7 419 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 CMAHPQ9Y471 501 aa11.26□□□□□ -0.61
RPAIN-202ENST00000381208 RNF212BA8MTL3 300 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 hCG_2039718K7EN88 272 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 M0QX08 132 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 PLPP3O14495 311 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 APEHP13798 732 aaKnown RBP11.25□□□□□ -0.61
RPAIN-202ENST00000381208 HNF1AP20823 631 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 CBLP22681 906 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 AHCYP23526 432 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 LSP1P33241 339 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 RPS23P62266 143 aaKnown RBP11.25□□□□□ -0.61
RPAIN-202ENST00000381208 HGFACQ04756 655 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 DAG1Q14118 895 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 GGTLC2Q14390 218 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 GSG1Q2KHT4 349 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 IQCCQ4KMZ1 466 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF813Q6ZN06 617 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 MDP1Q86V88 176 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 COMTD1Q86VU5 262 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 DOK1Q99704 481 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 ARHGDIGQ99819 225 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 SH3GL1Q99961 368 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 RSPO3Q9BXY4 272 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-202ENST00000381208 SLC19A3Q9BZV2 496 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 B3GNT2Q9NY97 397 aa11.25□□□□□ -0.61
RPAIN-202ENST00000381208 TPST2O60704 377 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 LY6HO94772 140 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 UBL3O95164 117 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 HPRP00739 348 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 HIST1H2ABP04908 130 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 ADORA3P0DMS8 318 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF23P17027 643 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 GIFP27352 417 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 THBS4P35443 961 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 CSNK1A1P48729 337 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 ZP4Q12836 540 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 SNTB2Q13425 540 aaKnown RBP11.24□□□□□ -0.61
RPAIN-202ENST00000381208 NFYCQ13952 458 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 CARTPTQ16568 116 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 TRMT5Q32P41 509 aaKnown RBP11.24□□□□□ -0.61
RPAIN-202ENST00000381208 CARD17Q5XLA6 110 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 REP15Q6BDI9 236 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 TTC33Q6PID6 262 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-202ENST00000381208 NHLRC1Q6VVB1 395 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 HIST3H2AQ7L7L0 130 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 PIWIL3Q7Z3Z3 882 aaKnown RBP11.24□□□□□ -0.61
RPAIN-202ENST00000381208 SPATA21Q7Z572 469 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 DPPA2Q7Z7J5 298 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 PTOV1Q86YD1 416 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 SMYD1Q8NB12 490 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 OR6X1Q8NH79 312 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 SLC26A7Q8TE54 656 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 HIST1H2ACQ93077 130 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF837Q96EG3 531 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-202ENST00000381208 FOXN4Q96NZ1 517 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 FOXB1Q99853 325 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 EMC6Q9BV81 110 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 PCDHAC1Q9H158 963 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 KAT8Q9H7Z6 458 aaKnown RBP11.24□□□□□ -0.61
RPAIN-202ENST00000381208 NOX3Q9HBY0 568 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 DYNLRB1Q9NP97 96 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 MED29Q9NX70 200 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 MXRA5Q9NR99 2828 aa11.24□□□□□ -0.61
RPAIN-202ENST00000381208 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.23□□□□□ -0.611e-8■■■□□ 16.6
RPAIN-202ENST00000381208 LOC100289279A0A1B0GTE1 492 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 TRAPPC13A5PLN9 417 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 MGRN1O60291 552 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 STAMBPO95630 424 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms