RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SEC22AQ96IW7 307 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 LYSMD1Q96S90 227 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 NOSIPQ9Y314 301 aaKnown RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF705FA8MVS1 300 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 LCMT2O60294 686 aaKnown RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF705DP0CH99 300 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF705BP0CI00 300 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF93P35789 620 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 LIM2P55344 173 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 CST9Q5W186 159 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 OLIG3Q7RTU3 272 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 LINC00346Q8IVM7 164 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 EDAQ92838 391 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 FAM3DQ96BQ1 224 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ZIC5Q96T25 663 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 KNL1Q8NG31 2342 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ARID1BQ8NFD5 2236 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 CCDC163A0A0D9SF12 145 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 C2orf72A6NCS6 295 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 PRICKLE3O43900 615 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 KCNK2O95069 426 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 LGI1O95970 557 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 KITLGP21583 273 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 VASH1Q7L8A9 365 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ZFPM2Q8WW38 1151 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 UBE2FQ969M7 185 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 NXPE3Q969Y0 559 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 ZNF223Q9UK11 482 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 PCDHB10Q9UN67 800 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 GPR55Q9Y2T6 319 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 GPR171O14626 319 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 FCN2Q15485 313 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 Q6ZNX1 250 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 RTN4RL1Q86UN2 441 aaPredicted RBP14.8□□□□□ -0.04
COL2A1-202ENST00000380518 CELF2-AS1Q8N7Q2 184 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 OR13H1Q8NG92 308 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 OR5H6Q8NGV6 325 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 DYNLRB1Q9NP97 96 aa14.8□□□□□ -0.04
COL2A1-202ENST00000380518 TMEM202A6NGA9 273 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 TMEM221A6NGB7 291 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 PIPP12273 146 aaPredicted RBP14.79□□□□□ -0.04
COL2A1-202ENST00000380518 NAGAP17050 411 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 PTBP1P26599 531 aaKnown RBP eCLIP14.79□□□□□ -0.04
COL2A1-202ENST00000380518 RPL34P49207 117 aaKnown RBP14.79□□□□□ -0.04
COL2A1-202ENST00000380518 CCR9P51686 369 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 SLC35A2P78381 396 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 LYSMD2Q8IV50 215 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 MS4A6EQ96DS6 147 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 Q96M85 177 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 SLC25A21Q9BQT8 299 aaPredicted RBP14.79□□□□□ -0.04
COL2A1-202ENST00000380518 FGF22Q9HCT0 170 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 TRABD2BA6NFA1 517 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 KRBOX1C9JBD0 128 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 CYB5BO43169 146 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 ABHD16AO95870 558 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 NID1P14543 1247 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 GABRA2P47869 451 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 SYT14P1Q58G82 188 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 GLYATL3Q5SZD4 288 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 RDH10Q8IZV5 341 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 NANOGP1Q8N7R0 232 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 PIGQQ9BRB3 760 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 TCEAL7Q9BRU2 100 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 ZDHHC5Q9C0B5 715 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 ARPC4-TTLL3A0A0A6YYG9 625 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 LOC100289279A0A1B0GTE1 492 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 LINC01553A4QN01 128 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 EIF4E2O60573 245 aaKnown RBP14.79□□□□□ -0.04
COL2A1-202ENST00000380518 TGM6O95932 706 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 F2RL1P55085 397 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 DUSP5Q16690 384 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 SFRP5Q5T4F7 317 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 C1orf140Q5VVS0 124 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 ADGRE4PQ86SQ3 457 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 ACER3Q9NUN7 267 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 RAB22AQ9UL26 194 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 A0A1B0GTW7 788 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 HSBP1L1C9JCN9 74 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 SRMP19623 302 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 RACK1P63244 317 aaKnown RBP14.79□□□□□ -0.04
COL2A1-202ENST00000380518 SAXO2Q658L1 398 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 OR1J2Q8NGS2 313 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 OR1E3Q8WZA6 343 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 RASD2Q96D21 266 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 NKX3-1Q99801 234 aaPredicted RBP14.79□□□□□ -0.04
COL2A1-202ENST00000380518 OR52A1Q9UKL2 312 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 DAPP1Q9UN19 280 aa14.79□□□□□ -0.04
COL2A1-202ENST00000380518 A0A0B4J2A0 478 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 PIP5K1CO60331 668 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 GLSO94925 669 aaPredicted RBP14.78□□□□□ -0.04
COL2A1-202ENST00000380518 B3GALT4O96024 378 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 ENPP1P22413 925 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 SLC6A12P48065 614 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 LIN37Q96GY3 246 aaPredicted RBP14.78□□□□□ -0.04
COL2A1-202ENST00000380518 ELF4Q99607 663 aaPredicted RBP14.78□□□□□ -0.04
COL2A1-202ENST00000380518 SLC19A3Q9BZV2 496 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 SHPKQ9UHJ6 478 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 C19orf53Q9UNZ5 99 aaPredicted RBP14.78□□□□□ -0.04
COL2A1-202ENST00000380518 OR5K3A6NET4 321 aa14.78□□□□□ -0.04
COL2A1-202ENST00000380518 TARM1B6A8C7 271 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms